Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RITA1Q96K30 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RITA1Q96K30 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.47■□□□□ 0.07
RITA1Q96K30 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.47■□□□□ 0.07
RITA1Q96K30 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RITA1Q96K30 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RITA1Q96K30 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.47■□□□□ 0.07
RITA1Q96K30 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RITA1Q96K30 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RITA1Q96K30 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RITA1Q96K30 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RITA1Q96K30 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RITA1Q96K30 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RITA1Q96K30 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RITA1Q96K30 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RITA1Q96K30 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RITA1Q96K30 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RITA1Q96K30 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RITA1Q96K30 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RITA1Q96K30 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.47■□□□□ 0.07
RITA1Q96K30 AC142381.4-202ENST00000563973 229 ntBASIC15.47■□□□□ 0.07
RITA1Q96K30 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.47■□□□□ 0.07
RITA1Q96K30 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
RITA1Q96K30 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.47■□□□□ 0.07
RITA1Q96K30 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RITA1Q96K30 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.47■□□□□ 0.07
RITA1Q96K30 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
RITA1Q96K30 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RITA1Q96K30 AC141586.3-201ENST00000562166 1838 ntBASIC15.47■□□□□ 0.07
RITA1Q96K30 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RITA1Q96K30 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RITA1Q96K30 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RITA1Q96K30 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RITA1Q96K30 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.46■□□□□ 0.07
RITA1Q96K30 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RITA1Q96K30 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.46■□□□□ 0.07
RITA1Q96K30 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RITA1Q96K30 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.46■□□□□ 0.07
RITA1Q96K30 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RITA1Q96K30 HTR7P1-201ENST00000538670 1336 ntBASIC15.46■□□□□ 0.07
RITA1Q96K30 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
RITA1Q96K30 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.46■□□□□ 0.07
RITA1Q96K30 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RITA1Q96K30 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.46■□□□□ 0.07
RITA1Q96K30 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RITA1Q96K30 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RITA1Q96K30 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RITA1Q96K30 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RITA1Q96K30 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RITA1Q96K30 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.46■□□□□ 0.07
RITA1Q96K30 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.46■□□□□ 0.07
RITA1Q96K30 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.46■□□□□ 0.07
RITA1Q96K30 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.46■□□□□ 0.07
RITA1Q96K30 FAM197Y4-202ENST00000622692 608 ntBASIC15.46■□□□□ 0.07
RITA1Q96K30 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.46■□□□□ 0.07
RITA1Q96K30 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.46■□□□□ 0.07
RITA1Q96K30 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.46■□□□□ 0.07
RITA1Q96K30 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RITA1Q96K30 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.46■□□□□ 0.07
RITA1Q96K30 AL161938.1-201ENST00000569833 2180 ntBASIC15.46■□□□□ 0.07
RITA1Q96K30 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RITA1Q96K30 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
RITA1Q96K30 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
RITA1Q96K30 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
RITA1Q96K30 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
RITA1Q96K30 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RITA1Q96K30 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.45■□□□□ 0.06
RITA1Q96K30 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
RITA1Q96K30 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RITA1Q96K30 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RITA1Q96K30 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.45■□□□□ 0.06
RITA1Q96K30 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RITA1Q96K30 AL158047.1-201ENST00000445918 881 ntBASIC15.45■□□□□ 0.06
RITA1Q96K30 RPS2P4-201ENST00000476944 856 ntBASIC15.45■□□□□ 0.06
RITA1Q96K30 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.45■□□□□ 0.06
RITA1Q96K30 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
RITA1Q96K30 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RITA1Q96K30 AL160286.2-201ENST00000567150 934 ntBASIC15.45■□□□□ 0.06
RITA1Q96K30 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.45■□□□□ 0.06
RITA1Q96K30 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RITA1Q96K30 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RITA1Q96K30 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.45■□□□□ 0.06
RITA1Q96K30 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.45■□□□□ 0.06
RITA1Q96K30 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RITA1Q96K30 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.45■□□□□ 0.06
RITA1Q96K30 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.45■□□□□ 0.06
RITA1Q96K30 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RITA1Q96K30 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RITA1Q96K30 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.45■□□□□ 0.06
RITA1Q96K30 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.45■□□□□ 0.06
RITA1Q96K30 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RITA1Q96K30 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
RITA1Q96K30 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
RITA1Q96K30 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RITA1Q96K30 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RITA1Q96K30 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RITA1Q96K30 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RITA1Q96K30 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.44■□□□□ 0.06
RITA1Q96K30 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.44■□□□□ 0.06
RITA1Q96K30 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms