Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LRRC39Q96DD0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC39Q96DD0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LRRC39Q96DD0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC39Q96DD0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC39Q96DD0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC39Q96DD0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC39Q96DD0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC39Q96DD0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
LRRC39Q96DD0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.46■□□□□ 0.71
LRRC39Q96DD0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.46■□□□□ 0.71
LRRC39Q96DD0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.46■□□□□ 0.71
LRRC39Q96DD0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LRRC39Q96DD0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LRRC39Q96DD0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
LRRC39Q96DD0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.46■□□□□ 0.71
LRRC39Q96DD0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC39Q96DD0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC39Q96DD0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.45■□□□□ 0.7
LRRC39Q96DD0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC39Q96DD0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LRRC39Q96DD0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC39Q96DD0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC39Q96DD0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.45■□□□□ 0.7
LRRC39Q96DD0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.45■□□□□ 0.7
LRRC39Q96DD0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.45■□□□□ 0.7
LRRC39Q96DD0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC39Q96DD0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC39Q96DD0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC39Q96DD0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC39Q96DD0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LRRC39Q96DD0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LRRC39Q96DD0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
LRRC39Q96DD0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC39Q96DD0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC39Q96DD0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.43■□□□□ 0.7
LRRC39Q96DD0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC39Q96DD0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms