Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 DPP3P2-201ENST00000416030 1696 ntBASIC16.8■□□□□ 0.28
USP9XQ93008 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP9XQ93008 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP9XQ93008 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP9XQ93008 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP9XQ93008 AKR1C7P-201ENST00000305623 895 ntBASIC16.8■□□□□ 0.28
USP9XQ93008 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.8■□□□□ 0.28
USP9XQ93008 AL031284.1-201ENST00000419297 478 ntBASIC16.8■□□□□ 0.28
USP9XQ93008 SAPCD2P3-201ENST00000455031 850 ntBASIC16.8■□□□□ 0.28
USP9XQ93008 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.8■□□□□ 0.28
USP9XQ93008 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.8■□□□□ 0.28
USP9XQ93008 AC064862.7-201ENST00000604520 867 ntBASIC16.8■□□□□ 0.28
USP9XQ93008 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.8■□□□□ 0.28
USP9XQ93008 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USP9XQ93008 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.8■□□□□ 0.28
USP9XQ93008 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.79■□□□□ 0.28
USP9XQ93008 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP9XQ93008 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP9XQ93008 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP9XQ93008 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
USP9XQ93008 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP9XQ93008 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP9XQ93008 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.79■□□□□ 0.28
USP9XQ93008 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.79■□□□□ 0.28
USP9XQ93008 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.79■□□□□ 0.28
USP9XQ93008 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP9XQ93008 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.79■□□□□ 0.28
USP9XQ93008 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP9XQ93008 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.79■□□□□ 0.28
USP9XQ93008 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP9XQ93008 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.79■□□□□ 0.28
USP9XQ93008 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.79■□□□□ 0.28
USP9XQ93008 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.79■□□□□ 0.28
USP9XQ93008 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.79■□□□□ 0.28
USP9XQ93008 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP9XQ93008 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP9XQ93008 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP9XQ93008 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
USP9XQ93008 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
USP9XQ93008 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.79■□□□□ 0.28
USP9XQ93008 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP9XQ93008 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
USP9XQ93008 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP9XQ93008 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP9XQ93008 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP9XQ93008 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.79■□□□□ 0.28
USP9XQ93008 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.79■□□□□ 0.28
USP9XQ93008 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.79■□□□□ 0.28
USP9XQ93008 AL390719.2-201ENST00000606993 987 ntBASIC16.79■□□□□ 0.28
USP9XQ93008 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.79■□□□□ 0.28
USP9XQ93008 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.79■□□□□ 0.28
USP9XQ93008 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.78■□□□□ 0.28
USP9XQ93008 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.78■□□□□ 0.28
USP9XQ93008 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 LINC00265-3P-201ENST00000447588 903 ntBASIC16.78■□□□□ 0.28
USP9XQ93008 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.78■□□□□ 0.28
USP9XQ93008 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.78■□□□□ 0.28
USP9XQ93008 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.78■□□□□ 0.28
USP9XQ93008 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
USP9XQ93008 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
USP9XQ93008 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 Z98882.1-201ENST00000622160 2253 ntBASIC16.78■□□□□ 0.28
USP9XQ93008 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.78■□□□□ 0.28
USP9XQ93008 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.78■□□□□ 0.28
USP9XQ93008 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.78■□□□□ 0.28
USP9XQ93008 AP001160.2-201ENST00000596071 487 ntBASIC16.78■□□□□ 0.28
USP9XQ93008 TERC-201ENST00000602385 541 ntBASIC16.78■□□□□ 0.28
USP9XQ93008 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
USP9XQ93008 AC055717.3-201ENST00000622967 595 ntBASIC16.78■□□□□ 0.28
USP9XQ93008 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP9XQ93008 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP9XQ93008 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.77■□□□□ 0.28
USP9XQ93008 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP9XQ93008 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP9XQ93008 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP9XQ93008 AL117328.2-201ENST00000624617 1940 ntBASIC16.77■□□□□ 0.28
USP9XQ93008 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.77■□□□□ 0.28
USP9XQ93008 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP9XQ93008 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP9XQ93008 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
USP9XQ93008 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP9XQ93008 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms