Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 HMGA1P5-201ENST00000412453 271 ntBASIC20■□□□□ 0.79
SH3RF2Q8TEC5 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 AC006011.2-201ENST00000621313 1158 ntBASIC20■□□□□ 0.79
SH3RF2Q8TEC5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
SH3RF2Q8TEC5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
SH3RF2Q8TEC5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SH3RF2Q8TEC5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SH3RF2Q8TEC5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SH3RF2Q8TEC5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SH3RF2Q8TEC5 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
SH3RF2Q8TEC5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.99■□□□□ 0.79
SH3RF2Q8TEC5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.99■□□□□ 0.79
SH3RF2Q8TEC5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SH3RF2Q8TEC5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3RF2Q8TEC5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3RF2Q8TEC5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SH3RF2Q8TEC5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3RF2Q8TEC5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SH3RF2Q8TEC5 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.99■□□□□ 0.79
SH3RF2Q8TEC5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3RF2Q8TEC5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.99■□□□□ 0.79
SH3RF2Q8TEC5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SH3RF2Q8TEC5 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 AC007663.1-201ENST00000438948 1240 ntBASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SH3RF2Q8TEC5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 AC092338.2-201ENST00000568827 1415 ntBASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SH3RF2Q8TEC5 BX664615.1-201ENST00000443558 458 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms