Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF3IP1Q8TDR0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF3IP1Q8TDR0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAF3IP1Q8TDR0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
TRAF3IP1Q8TDR0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF3IP1Q8TDR0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.07■□□□□ 0.8
TRAF3IP1Q8TDR0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF3IP1Q8TDR0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF3IP1Q8TDR0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF3IP1Q8TDR0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF3IP1Q8TDR0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TRAF3IP1Q8TDR0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TRAF3IP1Q8TDR0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TRAF3IP1Q8TDR0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF3IP1Q8TDR0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF3IP1Q8TDR0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 KRT17P3-201ENST00000420566 1262 ntBASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF3IP1Q8TDR0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF3IP1Q8TDR0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 LINC01465-201ENST00000408887 1940 ntBASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 AC008403.3-201ENST00000598924 454 ntBASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TRAF3IP1Q8TDR0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms