Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK4Q8NE63 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK4Q8NE63 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK4Q8NE63 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK4Q8NE63 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.68■□□□□ 0.58
HIPK4Q8NE63 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.68■□□□□ 0.58
HIPK4Q8NE63 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK4Q8NE63 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.68■□□□□ 0.58
HIPK4Q8NE63 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.68■□□□□ 0.58
HIPK4Q8NE63 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.68■□□□□ 0.58
HIPK4Q8NE63 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HIPK4Q8NE63 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HIPK4Q8NE63 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK4Q8NE63 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK4Q8NE63 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 AC079598.2-202ENST00000546624 1451 ntBASIC18.67■□□□□ 0.58
HIPK4Q8NE63 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.67■□□□□ 0.58
HIPK4Q8NE63 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 AC090164.3-201ENST00000610780 2143 ntBASIC18.67■□□□□ 0.58
HIPK4Q8NE63 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HIPK4Q8NE63 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 AC013268.1-206ENST00000638368 961 ntBASIC18.66■□□□□ 0.58
HIPK4Q8NE63 AC112229.1-201ENST00000639295 961 ntBASIC18.66■□□□□ 0.58
HIPK4Q8NE63 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 AC012313.1-201ENST00000593393 3059 ntBASIC18.66■□□□□ 0.58
HIPK4Q8NE63 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.66■□□□□ 0.58
HIPK4Q8NE63 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 AP000997.3-201ENST00000623333 2250 ntBASIC18.65■□□□□ 0.58
HIPK4Q8NE63 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 KRT18P11-201ENST00000435214 1283 ntBASIC18.65■□□□□ 0.58
HIPK4Q8NE63 AC034268.1-201ENST00000441047 882 ntBASIC18.65■□□□□ 0.58
HIPK4Q8NE63 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 AC016405.3-201ENST00000607710 860 ntBASIC18.65■□□□□ 0.58
HIPK4Q8NE63 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIPK4Q8NE63 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms