Protein–RNA interactions for Protein: Q8N6F1

CLDN19, Claudin-19, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN19Q8N6F1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 RPS2P55-201ENST00000397318 883 ntBASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 KSR1P1-201ENST00000446298 240 ntBASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 AC107956.1-201ENST00000494359 873 ntBASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 AL135905.2-201ENST00000584934 1404 ntBASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN19Q8N6F1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 TEX21P-204ENST00000641479 1693 ntBASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 CR392000.1-201ENST00000624770 1228 ntBASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN19Q8N6F1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 AC008550.1-201ENST00000511500 884 ntBASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 AC073195.1-201ENST00000607241 877 ntBASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN19Q8N6F1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN19Q8N6F1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.03■□□□□ 0.64
CLDN19Q8N6F1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CLDN19Q8N6F1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.03■□□□□ 0.64
CLDN19Q8N6F1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CLDN19Q8N6F1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN19Q8N6F1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CLDN19Q8N6F1 KRT16P1-201ENST00000399124 1418 ntBASIC19.03■□□□□ 0.64
CLDN19Q8N6F1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.03■□□□□ 0.64
CLDN19Q8N6F1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN19Q8N6F1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.03■□□□□ 0.64
CLDN19Q8N6F1 FAM197Y1-201ENST00000421178 764 ntBASIC19.03■□□□□ 0.64
CLDN19Q8N6F1 AC004980.1-204ENST00000429707 299 ntBASIC19.03■□□□□ 0.64
CLDN19Q8N6F1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.03■□□□□ 0.64
CLDN19Q8N6F1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.03■□□□□ 0.64
CLDN19Q8N6F1 AC233702.5-201ENST00000584107 538 ntBASIC19.03■□□□□ 0.64
CLDN19Q8N6F1 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.03■□□□□ 0.64
CLDN19Q8N6F1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN19Q8N6F1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms