Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAM1L1Q8N609 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAM1L1Q8N609 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAM1L1Q8N609 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAM1L1Q8N609 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAM1L1Q8N609 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAM1L1Q8N609 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAM1L1Q8N609 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAM1L1Q8N609 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TRAM1L1Q8N609 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAM1L1Q8N609 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 AC093484.2-201ENST00000580996 2166 ntBASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAM1L1Q8N609 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 TSPY21P-201ENST00000433481 731 ntBASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 TSPY15P-201ENST00000457163 923 ntBASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 SLC25A24-204ENST00000569674 2357 ntBASIC19.05■□□□□ 0.64
TRAM1L1Q8N609 AC079598.2-202ENST00000546624 1451 ntBASIC19.04■□□□□ 0.64
TRAM1L1Q8N609 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAM1L1Q8N609 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAM1L1Q8N609 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAM1L1Q8N609 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAM1L1Q8N609 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAM1L1Q8N609 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAM1L1Q8N609 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRAM1L1Q8N609 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.04■□□□□ 0.64
TRAM1L1Q8N609 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.04■□□□□ 0.64
TRAM1L1Q8N609 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAM1L1Q8N609 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TRAM1L1Q8N609 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAM1L1Q8N609 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAM1L1Q8N609 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TRAM1L1Q8N609 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAM1L1Q8N609 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAM1L1Q8N609 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 AC097488.1-201ENST00000507834 756 ntBASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAM1L1Q8N609 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAM1L1Q8N609 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms