Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PHTF2Q8N3S3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 AL137013.1-201ENST00000432946 1228 ntBASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 EGLN1P1-201ENST00000531623 762 ntBASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 AC010203.1-204ENST00000548782 407 ntBASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PHTF2Q8N3S3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 CRYGFP-201ENST00000418459 633 ntBASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 C2orf69P3-201ENST00000565542 1120 ntBASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 AL049597.2-201ENST00000565575 961 ntBASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 AC116562.4-201ENST00000641316 2276 ntBASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PHTF2Q8N3S3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 INGX-201ENST00000359239 846 ntBASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 Z85996.1-201ENST00000494644 937 ntBASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 AC011298.2-201ENST00000617989 482 ntBASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 KRT8P8-201ENST00000434750 1448 ntBASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 AP001271.2-201ENST00000624018 1556 ntBASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PHTF2Q8N3S3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
PHTF2Q8N3S3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 AC004951.3-201ENST00000418645 1148 ntBASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 AC096733.2-201ENST00000609937 1394 ntBASIC19.89■□□□□ 0.77
PHTF2Q8N3S3 AC125437.2-201ENST00000625180 2167 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms