Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC116Q8IYX3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 KRT18P29-201ENST00000397031 1267 ntBASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 C1QL1P1-201ENST00000568105 661 ntBASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 TEX21P-204ENST00000641479 1693 ntBASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 AP000974.1-201ENST00000623909 2387 ntBASIC18.15■□□□□ 0.5
CCDC116Q8IYX3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC116Q8IYX3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC116Q8IYX3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.14■□□□□ 0.5
CCDC116Q8IYX3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC116Q8IYX3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 RPPH1-201ENST00000516869 333 ntBASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 ITM2C-210ENST00000620962 501 ntBASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC116Q8IYX3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 HLA-A-209ENST00000638375 975 ntBASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 AC098818.2-201ENST00000564925 2320 ntBASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC116Q8IYX3 AC018445.3-201ENST00000624177 1945 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms