Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 AC020907.5-201ENST00000624372 1936 ntBASIC20.43■□□□□ 0.86
RNF135Q8IUD6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF135Q8IUD6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF135Q8IUD6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF135Q8IUD6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF135Q8IUD6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF135Q8IUD6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF135Q8IUD6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.42■□□□□ 0.86
RNF135Q8IUD6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF135Q8IUD6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
RNF135Q8IUD6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF135Q8IUD6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF135Q8IUD6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF135Q8IUD6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RNF135Q8IUD6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF135Q8IUD6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF135Q8IUD6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 GABARAPL3-202ENST00000624044 1851 ntBASIC20.41■□□□□ 0.86
RNF135Q8IUD6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 AL359075.1-203ENST00000462729 1002 ntBASIC20.41■□□□□ 0.86
RNF135Q8IUD6 AC010653.2-201ENST00000623505 997 ntBASIC20.41■□□□□ 0.86
RNF135Q8IUD6 AL031432.5-201ENST00000641059 760 ntBASIC20.41■□□□□ 0.86
RNF135Q8IUD6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RNF135Q8IUD6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 AC246785.2-201ENST00000432512 513 ntBASIC20.4■□□□□ 0.86
RNF135Q8IUD6 AC007663.1-201ENST00000438948 1240 ntBASIC20.4■□□□□ 0.86
RNF135Q8IUD6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 PTBP1P-201ENST00000554374 1601 ntBASIC20.4■□□□□ 0.86
RNF135Q8IUD6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF135Q8IUD6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF135Q8IUD6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.39■□□□□ 0.86
RNF135Q8IUD6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.39■□□□□ 0.86
RNF135Q8IUD6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF135Q8IUD6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF135Q8IUD6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RNF135Q8IUD6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.39■□□□□ 0.85
RNF135Q8IUD6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
RNF135Q8IUD6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF135Q8IUD6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF135Q8IUD6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.39■□□□□ 0.85
RNF135Q8IUD6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF135Q8IUD6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF135Q8IUD6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF135Q8IUD6 SLC25A1P2-201ENST00000430693 912 ntBASIC20.39■□□□□ 0.85
RNF135Q8IUD6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.39■□□□□ 0.85
RNF135Q8IUD6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.39■□□□□ 0.85
RNF135Q8IUD6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF135Q8IUD6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms