Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 PHGDH-210ENST00000641115 1638 ntBASIC18.38■□□□□ 0.53
RAB43Q86YS6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RAB43Q86YS6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB43Q86YS6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB43Q86YS6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB43Q86YS6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB43Q86YS6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB43Q86YS6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB43Q86YS6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB43Q86YS6 AC098818.2-201ENST00000564925 2320 ntBASIC18.37■□□□□ 0.53
RAB43Q86YS6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB43Q86YS6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB43Q86YS6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB43Q86YS6 RCN1P1-201ENST00000400413 996 ntBASIC18.37■□□□□ 0.53
RAB43Q86YS6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB43Q86YS6 KRT18P16-201ENST00000510337 1294 ntBASIC18.37■□□□□ 0.53
RAB43Q86YS6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.37■□□□□ 0.53
RAB43Q86YS6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB43Q86YS6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB43Q86YS6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB43Q86YS6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB43Q86YS6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB43Q86YS6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RAB43Q86YS6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB43Q86YS6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB43Q86YS6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB43Q86YS6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB43Q86YS6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB43Q86YS6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RAB43Q86YS6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
RAB43Q86YS6 AC073314.1-201ENST00000568729 2216 ntBASIC18.37■□□□□ 0.53
RAB43Q86YS6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB43Q86YS6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB43Q86YS6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB43Q86YS6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.36■□□□□ 0.53
RAB43Q86YS6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB43Q86YS6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB43Q86YS6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB43Q86YS6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB43Q86YS6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB43Q86YS6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB43Q86YS6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB43Q86YS6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RAB43Q86YS6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.36■□□□□ 0.53
RAB43Q86YS6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB43Q86YS6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB43Q86YS6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.36■□□□□ 0.53
RAB43Q86YS6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB43Q86YS6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB43Q86YS6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB43Q86YS6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB43Q86YS6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB43Q86YS6 FITM1-202ENST00000559294 800 ntBASIC18.36■□□□□ 0.53
RAB43Q86YS6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB43Q86YS6 FSCN1P1-201ENST00000568912 1481 ntBASIC18.36■□□□□ 0.53
RAB43Q86YS6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB43Q86YS6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB43Q86YS6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB43Q86YS6 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.36■□□□□ 0.53
RAB43Q86YS6 AC005363.2-201ENST00000618631 242 ntBASIC18.36■□□□□ 0.53
RAB43Q86YS6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB43Q86YS6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAB43Q86YS6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB43Q86YS6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 TMPOP1-202ENST00000424642 1267 ntBASIC18.35■□□□□ 0.53
RAB43Q86YS6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB43Q86YS6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.35■□□□□ 0.53
RAB43Q86YS6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB43Q86YS6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB43Q86YS6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RAB43Q86YS6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB43Q86YS6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB43Q86YS6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB43Q86YS6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB43Q86YS6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB43Q86YS6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RAB43Q86YS6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB43Q86YS6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB43Q86YS6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB43Q86YS6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB43Q86YS6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RAB43Q86YS6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
RAB43Q86YS6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms