Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4RL1Q86UN2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4RL1Q86UN2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4RL1Q86UN2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RTN4RL1Q86UN2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
RTN4RL1Q86UN2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.76■□□□□ 0.91
RTN4RL1Q86UN2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4RL1Q86UN2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTN4RL1Q86UN2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 STARP1-201ENST00000397973 869 ntBASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 KRT126P-201ENST00000549467 1181 ntBASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 AC093458.2-201ENST00000623150 629 ntBASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTN4RL1Q86UN2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4RL1Q86UN2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4RL1Q86UN2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4RL1Q86UN2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4RL1Q86UN2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4RL1Q86UN2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
RTN4RL1Q86UN2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.74■□□□□ 0.91
RTN4RL1Q86UN2 ZNF815P-204ENST00000434898 1737 ntBASIC20.74■□□□□ 0.91
RTN4RL1Q86UN2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.74■□□□□ 0.91
RTN4RL1Q86UN2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.74■□□□□ 0.91
RTN4RL1Q86UN2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.74■□□□□ 0.91
RTN4RL1Q86UN2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.74■□□□□ 0.91
RTN4RL1Q86UN2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTN4RL1Q86UN2 AL121894.2-201ENST00000602977 491 ntBASIC20.74■□□□□ 0.91
RTN4RL1Q86UN2 CR769767.2-201ENST00000622735 460 ntBASIC20.74■□□□□ 0.91
RTN4RL1Q86UN2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.74■□□□□ 0.91
RTN4RL1Q86UN2 TCF3P1-201ENST00000423021 1937 ntBASIC20.74■□□□□ 0.91
RTN4RL1Q86UN2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 AP000523.1-201ENST00000398242 1049 ntBASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 KRT18P48-201ENST00000434763 852 ntBASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 TSPY23P-201ENST00000440136 739 ntBASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 ZNF444P1-201ENST00000559497 298 ntBASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RTN4RL1Q86UN2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 SDHAP1-207ENST00000440850 2000 ntBASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 SPDYE15P-201ENST00000424157 909 ntBASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.72■□□□□ 0.91
RTN4RL1Q86UN2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTN4RL1Q86UN2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.71■□□□□ 0.91
RTN4RL1Q86UN2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTN4RL1Q86UN2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTN4RL1Q86UN2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RTN4RL1Q86UN2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms