Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.28■□□□□ 0.2
CSMD2Q7Z408 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD2Q7Z408 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD2Q7Z408 DRAXINP1-201ENST00000437611 948 ntBASIC16.28■□□□□ 0.2
CSMD2Q7Z408 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.28■□□□□ 0.2
CSMD2Q7Z408 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
CSMD2Q7Z408 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.27■□□□□ 0.2
CSMD2Q7Z408 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD2Q7Z408 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CSMD2Q7Z408 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD2Q7Z408 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD2Q7Z408 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD2Q7Z408 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD2Q7Z408 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.27■□□□□ 0.2
CSMD2Q7Z408 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD2Q7Z408 AC027796.2-201ENST00000575326 344 ntBASIC16.27■□□□□ 0.2
CSMD2Q7Z408 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CSMD2Q7Z408 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.27■□□□□ 0.2
CSMD2Q7Z408 PHGDH-210ENST00000641115 1638 ntBASIC16.27■□□□□ 0.2
CSMD2Q7Z408 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CSMD2Q7Z408 AC243591.1-201ENST00000452967 1364 ntBASIC16.27■□□□□ 0.2
CSMD2Q7Z408 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CSMD2Q7Z408 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CSMD2Q7Z408 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
CSMD2Q7Z408 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CSMD2Q7Z408 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CSMD2Q7Z408 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CSMD2Q7Z408 AP000867.3-201ENST00000524675 377 ntBASIC16.27■□□□□ 0.19
CSMD2Q7Z408 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.27■□□□□ 0.19
CSMD2Q7Z408 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.27■□□□□ 0.19
CSMD2Q7Z408 MIR4674-201ENST00000582457 87 ntBASIC16.27■□□□□ 0.19
CSMD2Q7Z408 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CSMD2Q7Z408 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD2Q7Z408 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.26■□□□□ 0.19
CSMD2Q7Z408 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD2Q7Z408 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.26■□□□□ 0.19
CSMD2Q7Z408 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD2Q7Z408 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD2Q7Z408 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.26■□□□□ 0.19
CSMD2Q7Z408 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.26■□□□□ 0.19
CSMD2Q7Z408 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.26■□□□□ 0.19
CSMD2Q7Z408 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD2Q7Z408 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD2Q7Z408 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.26■□□□□ 0.19
CSMD2Q7Z408 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD2Q7Z408 SAPCD2P3-201ENST00000455031 850 ntBASIC16.26■□□□□ 0.19
CSMD2Q7Z408 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.26■□□□□ 0.19
CSMD2Q7Z408 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.26■□□□□ 0.19
CSMD2Q7Z408 REXO1L6P-202ENST00000619970 1078 ntBASIC16.26■□□□□ 0.19
CSMD2Q7Z408 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD2Q7Z408 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD2Q7Z408 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 BX842568.4-201ENST00000421222 227 ntBASIC16.25■□□□□ 0.19
CSMD2Q7Z408 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 AL353801.3-201ENST00000609898 542 ntBASIC16.25■□□□□ 0.19
CSMD2Q7Z408 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 HLA-F-220ENST00000434407 884 ntBASIC16.25■□□□□ 0.19
CSMD2Q7Z408 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD2Q7Z408 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 AC055717.3-201ENST00000622967 595 ntBASIC16.24■□□□□ 0.19
CSMD2Q7Z408 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 FEM1AP1-201ENST00000431297 1995 ntBASIC16.24■□□□□ 0.19
CSMD2Q7Z408 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CSMD2Q7Z408 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms