Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RNF220Q5VTB9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF220Q5VTB9 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF220Q5VTB9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF220Q5VTB9 AC105020.6-201ENST00000621523 1217 ntBASIC18.52■□□□□ 0.56
RNF220Q5VTB9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.52■□□□□ 0.56
RNF220Q5VTB9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF220Q5VTB9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF220Q5VTB9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF220Q5VTB9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF220Q5VTB9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF220Q5VTB9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 AC124067.4-201ENST00000519691 2379 ntBASIC18.51■□□□□ 0.55
RNF220Q5VTB9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 AC007322.1-201ENST00000426983 750 ntBASIC18.51■□□□□ 0.55
RNF220Q5VTB9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 AC090164.3-201ENST00000610780 2143 ntBASIC18.51■□□□□ 0.55
RNF220Q5VTB9 AC008694.1-202ENST00000636953 945 ntBASIC18.51■□□□□ 0.55
RNF220Q5VTB9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 BICD1-207ENST00000551848 1962 ntBASIC18.51■□□□□ 0.55
RNF220Q5VTB9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF220Q5VTB9 AC138932.1-201ENST00000534164 6830 ntBASIC18.51■□□□□ 0.55
RNF220Q5VTB9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF220Q5VTB9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF220Q5VTB9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF220Q5VTB9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF220Q5VTB9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF220Q5VTB9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF220Q5VTB9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF220Q5VTB9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF220Q5VTB9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF220Q5VTB9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF220Q5VTB9 KRT18P68-201ENST00000392293 1000 ntBASIC18.49■□□□□ 0.55
RNF220Q5VTB9 AC022517.1-201ENST00000592429 346 ntBASIC18.49■□□□□ 0.55
RNF220Q5VTB9 OR10C1-204ENST00000622521 1039 ntBASIC18.49■□□□□ 0.55
RNF220Q5VTB9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RNF220Q5VTB9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RNF220Q5VTB9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF220Q5VTB9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF220Q5VTB9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF220Q5VTB9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RNF220Q5VTB9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RNF220Q5VTB9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RNF220Q5VTB9 PTBP1P-201ENST00000554374 1601 ntBASIC18.49■□□□□ 0.55
RNF220Q5VTB9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF220Q5VTB9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF220Q5VTB9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms