Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RC3H1Q5TC82 BX276092.5-203ENST00000456199 560 ntBASIC24.32■■□□□ 1.48
RC3H1Q5TC82 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC24.32■■□□□ 1.48
RC3H1Q5TC82 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC24.32■■□□□ 1.48
RC3H1Q5TC82 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC24.32■■□□□ 1.48
RC3H1Q5TC82 AC111152.3-201ENST00000569699 673 ntBASIC24.32■■□□□ 1.48
RC3H1Q5TC82 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC24.32■■□□□ 1.48
RC3H1Q5TC82 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC24.32■■□□□ 1.48
RC3H1Q5TC82 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RC3H1Q5TC82 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RC3H1Q5TC82 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RC3H1Q5TC82 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RC3H1Q5TC82 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC24.32■■□□□ 1.48
RC3H1Q5TC82 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RC3H1Q5TC82 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC24.31■■□□□ 1.48
RC3H1Q5TC82 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RC3H1Q5TC82 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RC3H1Q5TC82 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RC3H1Q5TC82 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
RC3H1Q5TC82 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RC3H1Q5TC82 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC24.31■■□□□ 1.48
RC3H1Q5TC82 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC24.31■■□□□ 1.48
RC3H1Q5TC82 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC24.31■■□□□ 1.48
RC3H1Q5TC82 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC24.31■■□□□ 1.48
RC3H1Q5TC82 AL691432.2-201ENST00000607222 2038 ntBASIC24.31■■□□□ 1.48
RC3H1Q5TC82 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RC3H1Q5TC82 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
RC3H1Q5TC82 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 AC004870.1-201ENST00000315132 882 ntBASIC24.3■■□□□ 1.48
RC3H1Q5TC82 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 FAAHP1-202ENST00000446499 1238 ntBASIC24.3■■□□□ 1.48
RC3H1Q5TC82 UNC93B7-201ENST00000509439 705 ntBASIC24.3■■□□□ 1.48
RC3H1Q5TC82 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 TBCB-205ENST00000585746 875 ntTSL 3 BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 KLK8-205ENST00000593490 267 ntTSL 3 BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC24.3■■□□□ 1.48
RC3H1Q5TC82 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 DET1-207ENST00000564406 2315 ntTSL 2 BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 AC104417.2-201ENST00000562989 1793 ntBASIC24.29■■□□□ 1.48
RC3H1Q5TC82 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 AL845331.1-201ENST00000424978 1190 ntBASIC24.29■■□□□ 1.48
RC3H1Q5TC82 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.29■■□□□ 1.48
RC3H1Q5TC82 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RC3H1Q5TC82 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RC3H1Q5TC82 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC24.28■■□□□ 1.48
RC3H1Q5TC82 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RC3H1Q5TC82 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RC3H1Q5TC82 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
RC3H1Q5TC82 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RC3H1Q5TC82 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RC3H1Q5TC82 NUS1P1-201ENST00000446295 882 ntBASIC24.28■■□□□ 1.48
RC3H1Q5TC82 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC24.28■■□□□ 1.48
RC3H1Q5TC82 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RC3H1Q5TC82 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RC3H1Q5TC82 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RC3H1Q5TC82 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
RC3H1Q5TC82 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
RC3H1Q5TC82 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RC3H1Q5TC82 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RC3H1Q5TC82 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
RC3H1Q5TC82 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RC3H1Q5TC82 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
RC3H1Q5TC82 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RC3H1Q5TC82 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RC3H1Q5TC82 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RC3H1Q5TC82 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC24.27■■□□□ 1.48
RC3H1Q5TC82 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RC3H1Q5TC82 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms