Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SNAPC4Q5SXM2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SNAPC4Q5SXM2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SNAPC4Q5SXM2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC31.59■■■□□ 2.65
SNAPC4Q5SXM2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC31.59■■■□□ 2.65
SNAPC4Q5SXM2 PMS2P1-201ENST00000431037 1228 ntBASIC31.59■■■□□ 2.65
SNAPC4Q5SXM2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC31.59■■■□□ 2.65
SNAPC4Q5SXM2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
SNAPC4Q5SXM2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SNAPC4Q5SXM2 AP001271.2-201ENST00000624018 1556 ntBASIC31.58■■■□□ 2.65
SNAPC4Q5SXM2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SNAPC4Q5SXM2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC31.58■■■□□ 2.65
SNAPC4Q5SXM2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC31.58■■■□□ 2.65
SNAPC4Q5SXM2 PENK-208ENST00000523051 772 ntTSL 5 BASIC31.58■■■□□ 2.65
SNAPC4Q5SXM2 AC024243.1-201ENST00000609234 778 ntBASIC31.58■■■□□ 2.65
SNAPC4Q5SXM2 NME4-212ENST00000621774 904 ntTSL 3 BASIC31.58■■■□□ 2.65
SNAPC4Q5SXM2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC31.58■■■□□ 2.65
SNAPC4Q5SXM2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SNAPC4Q5SXM2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC31.57■■■□□ 2.65
SNAPC4Q5SXM2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.65
SNAPC4Q5SXM2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SNAPC4Q5SXM2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC31.57■■■□□ 2.64
SNAPC4Q5SXM2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
SNAPC4Q5SXM2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SNAPC4Q5SXM2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SNAPC4Q5SXM2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC31.57■■■□□ 2.64
SNAPC4Q5SXM2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC31.57■■■□□ 2.64
SNAPC4Q5SXM2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC31.57■■■□□ 2.64
SNAPC4Q5SXM2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC31.57■■■□□ 2.64
SNAPC4Q5SXM2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC31.57■■■□□ 2.64
SNAPC4Q5SXM2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC31.57■■■□□ 2.64
SNAPC4Q5SXM2 BID-212ENST00000614949 1988 ntTSL 5 BASIC31.57■■■□□ 2.64
SNAPC4Q5SXM2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC31.57■■■□□ 2.64
SNAPC4Q5SXM2 AC133561.1-201ENST00000568600 2415 ntBASIC31.56■■■□□ 2.64
SNAPC4Q5SXM2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
SNAPC4Q5SXM2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
SNAPC4Q5SXM2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SNAPC4Q5SXM2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SNAPC4Q5SXM2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SNAPC4Q5SXM2 TSPY22P-201ENST00000427496 604 ntBASIC31.56■■■□□ 2.64
SNAPC4Q5SXM2 SEC1P-202ENST00000473944 940 ntBASIC31.56■■■□□ 2.64
SNAPC4Q5SXM2 RNF126P1-202ENST00000569893 925 ntBASIC31.56■■■□□ 2.64
SNAPC4Q5SXM2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
SNAPC4Q5SXM2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SNAPC4Q5SXM2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
SNAPC4Q5SXM2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
SNAPC4Q5SXM2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SNAPC4Q5SXM2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC31.55■■■□□ 2.64
SNAPC4Q5SXM2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SNAPC4Q5SXM2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC31.55■■■□□ 2.64
SNAPC4Q5SXM2 RNA5SP419-201ENST00000515908 135 ntBASIC31.55■■■□□ 2.64
SNAPC4Q5SXM2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC31.55■■■□□ 2.64
SNAPC4Q5SXM2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC31.55■■■□□ 2.64
SNAPC4Q5SXM2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SNAPC4Q5SXM2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC31.55■■■□□ 2.64
SNAPC4Q5SXM2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
SNAPC4Q5SXM2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SNAPC4Q5SXM2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
SNAPC4Q5SXM2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC31.55■■■□□ 2.64
SNAPC4Q5SXM2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
SNAPC4Q5SXM2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SNAPC4Q5SXM2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC31.54■■■□□ 2.64
SNAPC4Q5SXM2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC31.54■■■□□ 2.64
SNAPC4Q5SXM2 AC138894.3-201ENST00000603787 634 ntBASIC31.54■■■□□ 2.64
SNAPC4Q5SXM2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SNAPC4Q5SXM2 AC007225.1-201ENST00000566331 1836 ntBASIC31.54■■■□□ 2.64
SNAPC4Q5SXM2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SNAPC4Q5SXM2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC31.54■■■□□ 2.64
SNAPC4Q5SXM2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SNAPC4Q5SXM2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
SNAPC4Q5SXM2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SNAPC4Q5SXM2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SNAPC4Q5SXM2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SNAPC4Q5SXM2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SNAPC4Q5SXM2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC31.54■■■□□ 2.64
SNAPC4Q5SXM2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC31.54■■■□□ 2.64
SNAPC4Q5SXM2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC31.53■■■□□ 2.64
SNAPC4Q5SXM2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SNAPC4Q5SXM2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC31.53■■■□□ 2.64
SNAPC4Q5SXM2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SNAPC4Q5SXM2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
SNAPC4Q5SXM2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SNAPC4Q5SXM2 GPAT2P1-201ENST00000444924 1672 ntBASIC31.52■■■□□ 2.64
SNAPC4Q5SXM2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SNAPC4Q5SXM2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
SNAPC4Q5SXM2 SMG8-203ENST00000578922 2178 ntBASIC31.52■■■□□ 2.64
SNAPC4Q5SXM2 AC006128.1-201ENST00000624704 1661 ntBASIC31.52■■■□□ 2.64
SNAPC4Q5SXM2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC31.52■■■□□ 2.64
SNAPC4Q5SXM2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SNAPC4Q5SXM2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SNAPC4Q5SXM2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SNAPC4Q5SXM2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SNAPC4Q5SXM2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC31.52■■■□□ 2.64
SNAPC4Q5SXM2 AL136038.4-201ENST00000603606 1261 ntBASIC31.52■■■□□ 2.64
SNAPC4Q5SXM2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
SNAPC4Q5SXM2 TP73-AS1-207ENST00000624167 988 ntBASIC31.52■■■□□ 2.64
SNAPC4Q5SXM2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC31.51■■■□□ 2.64
SNAPC4Q5SXM2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
SNAPC4Q5SXM2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
SNAPC4Q5SXM2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC31.51■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms