Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 NUDT16P1-203ENST00000513809 620 ntBASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 KRT17P2-201ENST00000300992 1314 ntBASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 FSCN1P1-201ENST00000568912 1481 ntBASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 Z85996.1-201ENST00000494644 937 ntBASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01556Q5JQF7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 AC004951.3-201ENST00000418645 1148 ntBASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 MIR4497-201ENST00000583208 89 ntBASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 AC026471.5-201ENST00000615068 467 ntBASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC01556Q5JQF7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.08□□□□□ -0.31
LINC01556Q5JQF7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
LINC01556Q5JQF7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
LINC01556Q5JQF7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC13.08□□□□□ -0.31
LINC01556Q5JQF7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
LINC01556Q5JQF7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.08□□□□□ -0.31
LINC01556Q5JQF7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC01556Q5JQF7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01556Q5JQF7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC01556Q5JQF7 RCC2P6-201ENST00000526625 1557 ntBASIC13.08□□□□□ -0.32
LINC01556Q5JQF7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC01556Q5JQF7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
LINC01556Q5JQF7 LINC01465-201ENST00000408887 1940 ntBASIC13.08□□□□□ -0.32
LINC01556Q5JQF7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01556Q5JQF7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01556Q5JQF7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01556Q5JQF7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01556Q5JQF7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01556Q5JQF7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01556Q5JQF7 TSPY21P-201ENST00000433481 731 ntBASIC13.08□□□□□ -0.32
LINC01556Q5JQF7 SNORA78-201ENST00000459373 127 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms