Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.56■□□□□ 0.56
HMGCS1Q01581 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS1Q01581 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCS1Q01581 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCS1Q01581 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.55■□□□□ 0.56
HMGCS1Q01581 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.55■□□□□ 0.56
HMGCS1Q01581 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HMGCS1Q01581 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCS1Q01581 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCS1Q01581 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HMGCS1Q01581 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCS1Q01581 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCS1Q01581 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
HMGCS1Q01581 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCS1Q01581 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCS1Q01581 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCS1Q01581 TUBB8P6-201ENST00000436895 1288 ntBASIC18.55■□□□□ 0.56
HMGCS1Q01581 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.55■□□□□ 0.56
HMGCS1Q01581 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCS1Q01581 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCS1Q01581 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.55■□□□□ 0.56
HMGCS1Q01581 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.55■□□□□ 0.56
HMGCS1Q01581 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HMGCS1Q01581 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCS1Q01581 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HMGCS1Q01581 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCS1Q01581 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HMGCS1Q01581 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HMGCS1Q01581 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 AC020763.4-201ENST00000623414 4170 ntBASIC18.54■□□□□ 0.56
HMGCS1Q01581 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGCS1Q01581 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGCS1Q01581 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGCS1Q01581 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.54■□□□□ 0.56
HMGCS1Q01581 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HMGCS1Q01581 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.54■□□□□ 0.56
HMGCS1Q01581 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.54■□□□□ 0.56
HMGCS1Q01581 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HMGCS1Q01581 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HMGCS1Q01581 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.54■□□□□ 0.56
HMGCS1Q01581 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.54■□□□□ 0.56
HMGCS1Q01581 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.54■□□□□ 0.56
HMGCS1Q01581 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HMGCS1Q01581 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS1Q01581 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
HMGCS1Q01581 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGCS1Q01581 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGCS1Q01581 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.53■□□□□ 0.56
HMGCS1Q01581 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCS1Q01581 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCS1Q01581 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCS1Q01581 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
HMGCS1Q01581 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCS1Q01581 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGCS1Q01581 AC006333.2-201ENST00000607957 2099 ntBASIC18.53■□□□□ 0.56
HMGCS1Q01581 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCS1Q01581 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCS1Q01581 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCS1Q01581 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCS1Q01581 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.53■□□□□ 0.56
HMGCS1Q01581 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
HMGCS1Q01581 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
HMGCS1Q01581 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCS1Q01581 UNC93B5-201ENST00000530315 699 ntBASIC18.53■□□□□ 0.56
HMGCS1Q01581 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HMGCS1Q01581 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
HMGCS1Q01581 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCS1Q01581 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCS1Q01581 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCS1Q01581 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCS1Q01581 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.53■□□□□ 0.56
HMGCS1Q01581 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
HMGCS1Q01581 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMGCS1Q01581 CROCCP3-202ENST00000420820 1947 ntBASIC18.53■□□□□ 0.56
HMGCS1Q01581 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
HMGCS1Q01581 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCS1Q01581 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCS1Q01581 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCS1Q01581 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCS1Q01581 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMGCS1Q01581 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
HMGCS1Q01581 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms