Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.41■□□□□ 0.7
PRAMEP78395 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.41■□□□□ 0.7
PRAMEP78395 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
PRAMEP78395 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEP78395 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEP78395 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PRAMEP78395 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEP78395 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEP78395 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PRAMEP78395 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEP78395 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEP78395 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEP78395 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEP78395 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEP78395 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEP78395 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEP78395 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PRAMEP78395 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.4■□□□□ 0.7
PRAMEP78395 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.4■□□□□ 0.7
PRAMEP78395 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEP78395 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEP78395 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.4■□□□□ 0.7
PRAMEP78395 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.4■□□□□ 0.7
PRAMEP78395 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.4■□□□□ 0.7
PRAMEP78395 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.4■□□□□ 0.7
PRAMEP78395 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEP78395 MTDHP1-201ENST00000605323 784 ntBASIC19.4■□□□□ 0.7
PRAMEP78395 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEP78395 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PRAMEP78395 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEP78395 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.4■□□□□ 0.7
PRAMEP78395 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEP78395 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEP78395 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
PRAMEP78395 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEP78395 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEP78395 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEP78395 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEP78395 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRAMEP78395 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRAMEP78395 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRAMEP78395 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PRAMEP78395 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PRAMEP78395 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEP78395 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEP78395 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.39■□□□□ 0.69
PRAMEP78395 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEP78395 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEP78395 CD99P1-205ENST00000527459 561 ntBASIC19.39■□□□□ 0.69
PRAMEP78395 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.39■□□□□ 0.69
PRAMEP78395 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.39■□□□□ 0.69
PRAMEP78395 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEP78395 AC004264.1-201ENST00000608354 794 ntBASIC19.39■□□□□ 0.69
PRAMEP78395 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
PRAMEP78395 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEP78395 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
PRAMEP78395 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.39■□□□□ 0.69
PRAMEP78395 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEP78395 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEP78395 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PRAMEP78395 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEP78395 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEP78395 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEP78395 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEP78395 AC018445.3-201ENST00000624177 1945 ntBASIC19.39■□□□□ 0.69
PRAMEP78395 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.39■□□□□ 0.69
PRAMEP78395 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PRAMEP78395 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
PRAMEP78395 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEP78395 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRAMEP78395 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PRAMEP78395 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEP78395 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEP78395 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEP78395 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.38■□□□□ 0.69
PRAMEP78395 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEP78395 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.38■□□□□ 0.69
PRAMEP78395 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PRAMEP78395 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.38■□□□□ 0.69
PRAMEP78395 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEP78395 AC233263.1-201ENST00000578059 224 ntBASIC19.38■□□□□ 0.69
PRAMEP78395 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PRAMEP78395 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRAMEP78395 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEP78395 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEP78395 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.37■□□□□ 0.69
PRAMEP78395 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEP78395 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEP78395 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PRAMEP78395 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEP78395 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
PRAMEP78395 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEP78395 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PRAMEP78395 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEP78395 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.37■□□□□ 0.69
PRAMEP78395 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
PRAMEP78395 AC239809.2-201ENST00000415381 517 ntBASIC19.37■□□□□ 0.69
PRAMEP78395 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRAMEP78395 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.37■□□□□ 0.69
PRAMEP78395 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms