Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABREP78334 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
GABREP78334 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.32■□□□□ 0.52
GABREP78334 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.32■□□□□ 0.52
GABREP78334 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.32■□□□□ 0.52
GABREP78334 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.32■□□□□ 0.52
GABREP78334 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GABREP78334 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
GABREP78334 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
GABREP78334 AC083849.1-201ENST00000615227 514 ntBASIC18.32■□□□□ 0.52
GABREP78334 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.32■□□□□ 0.52
GABREP78334 AC012313.10-201ENST00000623509 926 ntBASIC18.32■□□□□ 0.52
GABREP78334 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABREP78334 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABREP78334 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABREP78334 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.32■□□□□ 0.52
GABREP78334 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABREP78334 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
GABREP78334 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
GABREP78334 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
GABREP78334 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABREP78334 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GABREP78334 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GABREP78334 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
GABREP78334 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.31■□□□□ 0.52
GABREP78334 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.31■□□□□ 0.52
GABREP78334 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
GABREP78334 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABREP78334 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABREP78334 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.31■□□□□ 0.52
GABREP78334 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
GABREP78334 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GABREP78334 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABREP78334 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.31■□□□□ 0.52
GABREP78334 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GABREP78334 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABREP78334 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.3■□□□□ 0.52
GABREP78334 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABREP78334 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
GABREP78334 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GABREP78334 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.3■□□□□ 0.52
GABREP78334 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABREP78334 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.3■□□□□ 0.52
GABREP78334 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABREP78334 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.3■□□□□ 0.52
GABREP78334 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GABREP78334 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.3■□□□□ 0.52
GABREP78334 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.3■□□□□ 0.52
GABREP78334 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.3■□□□□ 0.52
GABREP78334 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.3■□□□□ 0.52
GABREP78334 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.3■□□□□ 0.52
GABREP78334 LINC01311-201ENST00000565162 1445 ntBASIC18.3■□□□□ 0.52
GABREP78334 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GABREP78334 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GABREP78334 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABREP78334 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.3■□□□□ 0.52
GABREP78334 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABREP78334 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GABREP78334 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABREP78334 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABREP78334 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.29■□□□□ 0.52
GABREP78334 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABREP78334 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
GABREP78334 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.29■□□□□ 0.52
GABREP78334 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABREP78334 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GABREP78334 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.29■□□□□ 0.52
GABREP78334 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABREP78334 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.29■□□□□ 0.52
GABREP78334 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABREP78334 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABREP78334 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GABREP78334 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GABREP78334 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABREP78334 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
GABREP78334 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.29■□□□□ 0.52
GABREP78334 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.29■□□□□ 0.52
GABREP78334 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.29■□□□□ 0.52
GABREP78334 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.29■□□□□ 0.52
GABREP78334 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.29■□□□□ 0.52
GABREP78334 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.29■□□□□ 0.52
GABREP78334 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABREP78334 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.29■□□□□ 0.52
GABREP78334 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
GABREP78334 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABREP78334 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.29■□□□□ 0.52
GABREP78334 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABREP78334 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GABREP78334 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
GABREP78334 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.29■□□□□ 0.52
GABREP78334 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.29■□□□□ 0.52
GABREP78334 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.29■□□□□ 0.52
GABREP78334 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABREP78334 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABREP78334 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GABREP78334 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GABREP78334 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABREP78334 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABREP78334 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABREP78334 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms