Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.56■□□□□ 0.4
CXCR4P61073 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CXCR4P61073 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.56■□□□□ 0.4
CXCR4P61073 MCRIP2P1-201ENST00000394346 511 ntBASIC17.56■□□□□ 0.4
CXCR4P61073 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.56■□□□□ 0.4
CXCR4P61073 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CXCR4P61073 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CXCR4P61073 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.56■□□□□ 0.4
CXCR4P61073 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.56■□□□□ 0.4
CXCR4P61073 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CXCR4P61073 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CXCR4P61073 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CXCR4P61073 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CXCR4P61073 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.56■□□□□ 0.4
CXCR4P61073 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CXCR4P61073 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.56■□□□□ 0.4
CXCR4P61073 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CXCR4P61073 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CXCR4P61073 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CXCR4P61073 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.55■□□□□ 0.4
CXCR4P61073 ZNF815P-204ENST00000434898 1737 ntBASIC17.55■□□□□ 0.4
CXCR4P61073 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.55■□□□□ 0.4
CXCR4P61073 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CXCR4P61073 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CXCR4P61073 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.55■□□□□ 0.4
CXCR4P61073 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CXCR4P61073 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CXCR4P61073 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CXCR4P61073 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.55■□□□□ 0.4
CXCR4P61073 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CXCR4P61073 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CXCR4P61073 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CXCR4P61073 KRT18P11-201ENST00000435214 1283 ntBASIC17.55■□□□□ 0.4
CXCR4P61073 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CXCR4P61073 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CXCR4P61073 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CXCR4P61073 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.55■□□□□ 0.4
CXCR4P61073 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.55■□□□□ 0.4
CXCR4P61073 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.55■□□□□ 0.4
CXCR4P61073 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.55■□□□□ 0.4
CXCR4P61073 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CXCR4P61073 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CXCR4P61073 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CXCR4P61073 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CXCR4P61073 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CXCR4P61073 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.55■□□□□ 0.4
CXCR4P61073 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CXCR4P61073 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CXCR4P61073 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
CXCR4P61073 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CXCR4P61073 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CXCR4P61073 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.55■□□□□ 0.4
CXCR4P61073 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CXCR4P61073 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CXCR4P61073 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.54■□□□□ 0.4
CXCR4P61073 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CXCR4P61073 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CXCR4P61073 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CXCR4P61073 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.54■□□□□ 0.4
CXCR4P61073 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CXCR4P61073 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.54■□□□□ 0.4
CXCR4P61073 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.54■□□□□ 0.4
CXCR4P61073 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CXCR4P61073 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CXCR4P61073 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.54■□□□□ 0.4
CXCR4P61073 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.54■□□□□ 0.4
CXCR4P61073 AC100791.3-201ENST00000617619 330 ntBASIC17.54■□□□□ 0.4
CXCR4P61073 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CXCR4P61073 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CXCR4P61073 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CXCR4P61073 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CXCR4P61073 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CXCR4P61073 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CXCR4P61073 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CXCR4P61073 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
CXCR4P61073 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.54■□□□□ 0.4
CXCR4P61073 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CXCR4P61073 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXCR4P61073 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXCR4P61073 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXCR4P61073 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXCR4P61073 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXCR4P61073 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXCR4P61073 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXCR4P61073 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.53■□□□□ 0.4
CXCR4P61073 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXCR4P61073 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CXCR4P61073 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.53■□□□□ 0.4
CXCR4P61073 AC034268.1-201ENST00000441047 882 ntBASIC17.53■□□□□ 0.4
CXCR4P61073 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXCR4P61073 RARRES2P4-201ENST00000514074 484 ntBASIC17.53■□□□□ 0.4
CXCR4P61073 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.53■□□□□ 0.4
CXCR4P61073 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.53■□□□□ 0.4
CXCR4P61073 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXCR4P61073 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.53■□□□□ 0.4
CXCR4P61073 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
CXCR4P61073 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.53■□□□□ 0.4
CXCR4P61073 AC105020.6-201ENST00000621523 1217 ntBASIC17.53■□□□□ 0.4
CXCR4P61073 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CXCR4P61073 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms