Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CLRN1P58418 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLRN1P58418 AC020763.4-201ENST00000623414 4170 ntBASIC17.21■□□□□ 0.35
CLRN1P58418 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.21■□□□□ 0.35
CLRN1P58418 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLRN1P58418 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLRN1P58418 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLRN1P58418 KRASP1-201ENST00000407852 552 ntBASIC17.21■□□□□ 0.35
CLRN1P58418 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CLRN1P58418 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.21■□□□□ 0.35
CLRN1P58418 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.21■□□□□ 0.35
CLRN1P58418 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.21■□□□□ 0.35
CLRN1P58418 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLRN1P58418 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLRN1P58418 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CLRN1P58418 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.21■□□□□ 0.35
CLRN1P58418 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.21■□□□□ 0.35
CLRN1P58418 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLRN1P58418 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLRN1P58418 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLRN1P58418 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLRN1P58418 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLRN1P58418 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.21■□□□□ 0.34
CLRN1P58418 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLRN1P58418 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLRN1P58418 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.21■□□□□ 0.34
CLRN1P58418 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
CLRN1P58418 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.2■□□□□ 0.34
CLRN1P58418 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLRN1P58418 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLRN1P58418 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLRN1P58418 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLRN1P58418 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLRN1P58418 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLRN1P58418 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.2■□□□□ 0.34
CLRN1P58418 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.2■□□□□ 0.34
CLRN1P58418 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLRN1P58418 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLRN1P58418 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLRN1P58418 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLRN1P58418 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLRN1P58418 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CLRN1P58418 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.2■□□□□ 0.34
CLRN1P58418 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CLRN1P58418 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.2■□□□□ 0.34
CLRN1P58418 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.2■□□□□ 0.34
CLRN1P58418 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.2■□□□□ 0.34
CLRN1P58418 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLRN1P58418 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.2■□□□□ 0.34
CLRN1P58418 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLRN1P58418 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLRN1P58418 AC090340.1-201ENST00000620778 4980 ntBASIC17.2■□□□□ 0.34
CLRN1P58418 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.2■□□□□ 0.34
CLRN1P58418 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.2■□□□□ 0.34
CLRN1P58418 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLRN1P58418 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLRN1P58418 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLRN1P58418 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLRN1P58418 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLRN1P58418 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CLRN1P58418 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLRN1P58418 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLRN1P58418 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.19■□□□□ 0.34
CLRN1P58418 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.19■□□□□ 0.34
CLRN1P58418 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.19■□□□□ 0.34
CLRN1P58418 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 AC073648.6-201ENST00000641589 218 ntBASIC17.19■□□□□ 0.34
CLRN1P58418 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.19■□□□□ 0.34
CLRN1P58418 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CLRN1P58418 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CLRN1P58418 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CLRN1P58418 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.19■□□□□ 0.34
CLRN1P58418 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLRN1P58418 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.18■□□□□ 0.34
CLRN1P58418 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLRN1P58418 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.18■□□□□ 0.34
CLRN1P58418 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CLRN1P58418 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CLRN1P58418 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLRN1P58418 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLRN1P58418 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms