Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CLDN2P57739 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CLDN2P57739 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.04■□□□□ 0.64
CLDN2P57739 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN2P57739 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN2P57739 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN2P57739 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN2P57739 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN2P57739 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.03■□□□□ 0.64
CLDN2P57739 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.03■□□□□ 0.64
CLDN2P57739 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CLDN2P57739 KRT8P11-201ENST00000409686 1436 ntBASIC19.03■□□□□ 0.64
CLDN2P57739 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN2P57739 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CLDN2P57739 AK4P3-201ENST00000418260 669 ntBASIC19.03■□□□□ 0.64
CLDN2P57739 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.03■□□□□ 0.64
CLDN2P57739 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN2P57739 BX664615.1-201ENST00000443558 458 ntBASIC19.03■□□□□ 0.64
CLDN2P57739 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.03■□□□□ 0.64
CLDN2P57739 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.03■□□□□ 0.64
CLDN2P57739 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.03■□□□□ 0.64
CLDN2P57739 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN2P57739 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN2P57739 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
CLDN2P57739 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
CLDN2P57739 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CLDN2P57739 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN2P57739 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.02■□□□□ 0.64
CLDN2P57739 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN2P57739 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN2P57739 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.02■□□□□ 0.64
CLDN2P57739 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.02■□□□□ 0.64
CLDN2P57739 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CLDN2P57739 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN2P57739 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CLDN2P57739 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN2P57739 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.02■□□□□ 0.64
CLDN2P57739 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.02■□□□□ 0.64
CLDN2P57739 AC117947.1-201ENST00000427448 529 ntBASIC19.02■□□□□ 0.64
CLDN2P57739 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.02■□□□□ 0.64
CLDN2P57739 TSPY17P-201ENST00000450329 467 ntBASIC19.02■□□□□ 0.64
CLDN2P57739 AL353719.1-201ENST00000566847 864 ntBASIC19.02■□□□□ 0.64
CLDN2P57739 AC139887.4-201ENST00000607877 719 ntBASIC19.02■□□□□ 0.64
CLDN2P57739 AL138966.2-201ENST00000621997 464 ntBASIC19.02■□□□□ 0.64
CLDN2P57739 AC010653.2-201ENST00000623505 997 ntBASIC19.02■□□□□ 0.64
CLDN2P57739 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN2P57739 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.02■□□□□ 0.64
CLDN2P57739 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN2P57739 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN2P57739 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLDN2P57739 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
CLDN2P57739 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CLDN2P57739 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.02■□□□□ 0.63
CLDN2P57739 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.02■□□□□ 0.63
CLDN2P57739 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CLDN2P57739 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN2P57739 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN2P57739 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.01■□□□□ 0.63
CLDN2P57739 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN2P57739 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
CLDN2P57739 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN2P57739 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CLDN2P57739 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CLDN2P57739 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN2P57739 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN2P57739 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN2P57739 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN2P57739 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN2P57739 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.01■□□□□ 0.63
CLDN2P57739 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CLDN2P57739 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN2P57739 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN2P57739 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.01■□□□□ 0.63
CLDN2P57739 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN2P57739 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN2P57739 AC104417.2-201ENST00000562989 1793 ntBASIC19.01■□□□□ 0.63
CLDN2P57739 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLDN2P57739 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLDN2P57739 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN2P57739 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19■□□□□ 0.63
CLDN2P57739 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN2P57739 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CLDN2P57739 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19■□□□□ 0.63
CLDN2P57739 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN2P57739 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN2P57739 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN2P57739 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN2P57739 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN2P57739 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN2P57739 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN2P57739 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN2P57739 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19■□□□□ 0.63
CLDN2P57739 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19■□□□□ 0.63
CLDN2P57739 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19■□□□□ 0.63
CLDN2P57739 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19■□□□□ 0.63
CLDN2P57739 AC087388.1-201ENST00000571370 1112 ntBASIC19■□□□□ 0.63
CLDN2P57739 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
CLDN2P57739 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19■□□□□ 0.63
CLDN2P57739 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN2P57739 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms