Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.38□□□□□ -0.11
CMC4P56277 AC066615.1-201ENST00000640911 628 ntBASIC14.38□□□□□ -0.11
CMC4P56277 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.38□□□□□ -0.11
CMC4P56277 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CMC4P56277 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.37□□□□□ -0.11
CMC4P56277 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.37□□□□□ -0.11
CMC4P56277 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.37□□□□□ -0.11
CMC4P56277 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CMC4P56277 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CMC4P56277 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.37□□□□□ -0.11
CMC4P56277 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.37□□□□□ -0.11
CMC4P56277 AC004980.1-204ENST00000429707 299 ntBASIC14.37□□□□□ -0.11
CMC4P56277 TSPY21P-201ENST00000433481 731 ntBASIC14.37□□□□□ -0.11
CMC4P56277 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.37□□□□□ -0.11
CMC4P56277 AC093827.2-201ENST00000512654 315 ntBASIC14.37□□□□□ -0.11
CMC4P56277 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.37□□□□□ -0.11
CMC4P56277 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.37□□□□□ -0.11
CMC4P56277 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 DGCR10-201ENST00000609839 495 ntBASIC14.37□□□□□ -0.11
CMC4P56277 AC026471.5-201ENST00000615068 467 ntBASIC14.37□□□□□ -0.11
CMC4P56277 AC113410.3-201ENST00000623366 203 ntBASIC14.37□□□□□ -0.11
CMC4P56277 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.37□□□□□ -0.11
CMC4P56277 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.37□□□□□ -0.11
CMC4P56277 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CMC4P56277 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CMC4P56277 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.37□□□□□ -0.11
CMC4P56277 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.37□□□□□ -0.11
CMC4P56277 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CMC4P56277 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CMC4P56277 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CMC4P56277 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMC4P56277 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CMC4P56277 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CMC4P56277 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.36□□□□□ -0.11
CMC4P56277 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.36□□□□□ -0.11
CMC4P56277 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.36□□□□□ -0.11
CMC4P56277 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CMC4P56277 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CMC4P56277 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CMC4P56277 AC116562.2-201ENST00000507042 360 ntBASIC14.36□□□□□ -0.11
CMC4P56277 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.36□□□□□ -0.11
CMC4P56277 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.36□□□□□ -0.11
CMC4P56277 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.36□□□□□ -0.11
CMC4P56277 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMC4P56277 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMC4P56277 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CMC4P56277 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.36□□□□□ -0.11
CMC4P56277 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CMC4P56277 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CMC4P56277 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.36□□□□□ -0.11
CMC4P56277 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.36□□□□□ -0.11
CMC4P56277 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CMC4P56277 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.36□□□□□ -0.11
CMC4P56277 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.36□□□□□ -0.11
CMC4P56277 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.35□□□□□ -0.11
CMC4P56277 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CMC4P56277 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CMC4P56277 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.35□□□□□ -0.11
CMC4P56277 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CMC4P56277 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms