Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SUMO3P55854 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUMO3P55854 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUMO3P55854 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUMO3P55854 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.48■□□□□ 0.39
SUMO3P55854 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUMO3P55854 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SUMO3P55854 KRT8P41-201ENST00000533985 1514 ntBASIC17.47■□□□□ 0.39
SUMO3P55854 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SUMO3P55854 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SUMO3P55854 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SUMO3P55854 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SUMO3P55854 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SUMO3P55854 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.47■□□□□ 0.39
SUMO3P55854 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SUMO3P55854 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SUMO3P55854 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
SUMO3P55854 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SUMO3P55854 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SUMO3P55854 AC004951.3-201ENST00000418645 1148 ntBASIC17.47■□□□□ 0.39
SUMO3P55854 FAM197Y1-201ENST00000421178 764 ntBASIC17.47■□□□□ 0.39
SUMO3P55854 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.47■□□□□ 0.39
SUMO3P55854 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.47■□□□□ 0.39
SUMO3P55854 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.47■□□□□ 0.39
SUMO3P55854 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.47■□□□□ 0.39
SUMO3P55854 AC113410.3-201ENST00000623366 203 ntBASIC17.47■□□□□ 0.39
SUMO3P55854 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.47■□□□□ 0.39
SUMO3P55854 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SUMO3P55854 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SUMO3P55854 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.47■□□□□ 0.39
SUMO3P55854 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SUMO3P55854 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.47■□□□□ 0.39
SUMO3P55854 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SUMO3P55854 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SUMO3P55854 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SUMO3P55854 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SUMO3P55854 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SUMO3P55854 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SUMO3P55854 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SUMO3P55854 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.46■□□□□ 0.39
SUMO3P55854 TEX21P-204ENST00000641479 1693 ntBASIC17.46■□□□□ 0.39
SUMO3P55854 RCC2P6-201ENST00000526625 1557 ntBASIC17.46■□□□□ 0.39
SUMO3P55854 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
SUMO3P55854 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SUMO3P55854 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.46■□□□□ 0.39
SUMO3P55854 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.46■□□□□ 0.39
SUMO3P55854 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SUMO3P55854 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SUMO3P55854 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SUMO3P55854 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SUMO3P55854 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SUMO3P55854 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.46■□□□□ 0.39
SUMO3P55854 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SUMO3P55854 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.46■□□□□ 0.39
SUMO3P55854 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.46■□□□□ 0.39
SUMO3P55854 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.46■□□□□ 0.39
SUMO3P55854 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
SUMO3P55854 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.46■□□□□ 0.39
SUMO3P55854 AC007952.6-201ENST00000573168 2673 ntBASIC17.46■□□□□ 0.39
SUMO3P55854 AC003957.1-201ENST00000625108 2673 ntBASIC17.46■□□□□ 0.39
SUMO3P55854 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SUMO3P55854 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SUMO3P55854 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SUMO3P55854 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SUMO3P55854 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SUMO3P55854 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SUMO3P55854 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SUMO3P55854 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.46■□□□□ 0.39
SUMO3P55854 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SUMO3P55854 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
SUMO3P55854 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.46■□□□□ 0.38
SUMO3P55854 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SUMO3P55854 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SUMO3P55854 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.45■□□□□ 0.38
SUMO3P55854 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SUMO3P55854 FSCN1P1-201ENST00000568912 1481 ntBASIC17.45■□□□□ 0.38
SUMO3P55854 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SUMO3P55854 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.45■□□□□ 0.38
SUMO3P55854 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.45■□□□□ 0.38
SUMO3P55854 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.45■□□□□ 0.38
SUMO3P55854 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SUMO3P55854 NUDT16P1-203ENST00000513809 620 ntBASIC17.45■□□□□ 0.38
SUMO3P55854 PRSS44-201ENST00000515154 1146 ntBASIC17.45■□□□□ 0.38
SUMO3P55854 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.45■□□□□ 0.38
SUMO3P55854 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.45■□□□□ 0.38
SUMO3P55854 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SUMO3P55854 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.45■□□□□ 0.38
SUMO3P55854 Z99916.2-201ENST00000604037 246 ntBASIC17.45■□□□□ 0.38
SUMO3P55854 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SUMO3P55854 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.45■□□□□ 0.38
SUMO3P55854 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SUMO3P55854 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SUMO3P55854 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SUMO3P55854 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SUMO3P55854 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SUMO3P55854 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SUMO3P55854 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SUMO3P55854 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SUMO3P55854 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SUMO3P55854 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms