Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.13■□□□□ 0.81
EPHB3P54753 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPHB3P54753 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
EPHB3P54753 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.13■□□□□ 0.81
EPHB3P54753 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.13■□□□□ 0.81
EPHB3P54753 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.13■□□□□ 0.81
EPHB3P54753 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPHB3P54753 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.13■□□□□ 0.81
EPHB3P54753 TSPY5P-201ENST00000426936 936 ntBASIC20.13■□□□□ 0.81
EPHB3P54753 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.13■□□□□ 0.81
EPHB3P54753 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EPHB3P54753 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
EPHB3P54753 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EPHB3P54753 AC104417.2-201ENST00000562989 1793 ntBASIC20.13■□□□□ 0.81
EPHB3P54753 ZNF815P-204ENST00000434898 1737 ntBASIC20.13■□□□□ 0.81
EPHB3P54753 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
EPHB3P54753 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPHB3P54753 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.13■□□□□ 0.81
EPHB3P54753 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB3P54753 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
EPHB3P54753 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB3P54753 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB3P54753 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.12■□□□□ 0.81
EPHB3P54753 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB3P54753 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB3P54753 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.12■□□□□ 0.81
EPHB3P54753 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
EPHB3P54753 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB3P54753 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.12■□□□□ 0.81
EPHB3P54753 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.12■□□□□ 0.81
EPHB3P54753 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB3P54753 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.12■□□□□ 0.81
EPHB3P54753 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.12■□□□□ 0.81
EPHB3P54753 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB3P54753 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.12■□□□□ 0.81
EPHB3P54753 AC092647.4-201ENST00000457211 535 ntBASIC20.12■□□□□ 0.81
EPHB3P54753 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
EPHB3P54753 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.12■□□□□ 0.81
EPHB3P54753 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.12■□□□□ 0.81
EPHB3P54753 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.12■□□□□ 0.81
EPHB3P54753 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB3P54753 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.12■□□□□ 0.81
EPHB3P54753 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
EPHB3P54753 AC140113.3-201ENST00000605663 199 ntBASIC20.12■□□□□ 0.81
EPHB3P54753 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.12■□□□□ 0.81
EPHB3P54753 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPHB3P54753 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
EPHB3P54753 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB3P54753 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB3P54753 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
EPHB3P54753 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.11■□□□□ 0.81
EPHB3P54753 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB3P54753 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.11■□□□□ 0.81
EPHB3P54753 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB3P54753 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.11■□□□□ 0.81
EPHB3P54753 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB3P54753 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB3P54753 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.11■□□□□ 0.81
EPHB3P54753 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB3P54753 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.11■□□□□ 0.81
EPHB3P54753 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.11■□□□□ 0.81
EPHB3P54753 FAM8A6P-201ENST00000407496 1135 ntBASIC20.11■□□□□ 0.81
EPHB3P54753 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.11■□□□□ 0.81
EPHB3P54753 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB3P54753 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
EPHB3P54753 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB3P54753 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.11■□□□□ 0.81
EPHB3P54753 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
EPHB3P54753 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.11■□□□□ 0.81
EPHB3P54753 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.11■□□□□ 0.81
EPHB3P54753 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB3P54753 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.11■□□□□ 0.81
EPHB3P54753 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPHB3P54753 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
EPHB3P54753 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB3P54753 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB3P54753 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB3P54753 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.1■□□□□ 0.81
EPHB3P54753 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB3P54753 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB3P54753 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.1■□□□□ 0.81
EPHB3P54753 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB3P54753 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB3P54753 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB3P54753 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB3P54753 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB3P54753 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.1■□□□□ 0.81
EPHB3P54753 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB3P54753 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.1■□□□□ 0.81
EPHB3P54753 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.1■□□□□ 0.81
EPHB3P54753 AC011558.1-201ENST00000623459 338 ntBASIC20.1■□□□□ 0.81
EPHB3P54753 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB3P54753 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.1■□□□□ 0.81
EPHB3P54753 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB3P54753 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
EPHB3P54753 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.1■□□□□ 0.81
EPHB3P54753 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
EPHB3P54753 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
EPHB3P54753 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.09■□□□□ 0.81
EPHB3P54753 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms