Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARCN1P48444 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARCN1P48444 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.31■□□□□ 0.68
ARCN1P48444 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ARCN1P48444 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ARCN1P48444 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ARCN1P48444 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ARCN1P48444 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.31■□□□□ 0.68
ARCN1P48444 AC093503.3-201ENST00000624917 2352 ntBASIC19.3■□□□□ 0.68
ARCN1P48444 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARCN1P48444 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.3■□□□□ 0.68
ARCN1P48444 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARCN1P48444 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARCN1P48444 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ARCN1P48444 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.3■□□□□ 0.68
ARCN1P48444 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARCN1P48444 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARCN1P48444 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.3■□□□□ 0.68
ARCN1P48444 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARCN1P48444 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARCN1P48444 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ARCN1P48444 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARCN1P48444 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARCN1P48444 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARCN1P48444 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARCN1P48444 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.3■□□□□ 0.68
ARCN1P48444 PRKY-204ENST00000533551 1019 ntBASIC19.3■□□□□ 0.68
ARCN1P48444 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.3■□□□□ 0.68
ARCN1P48444 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARCN1P48444 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ARCN1P48444 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARCN1P48444 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ARCN1P48444 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ARCN1P48444 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.3■□□□□ 0.68
ARCN1P48444 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARCN1P48444 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ARCN1P48444 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.3■□□□□ 0.68
ARCN1P48444 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.3■□□□□ 0.68
ARCN1P48444 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ARCN1P48444 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARCN1P48444 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARCN1P48444 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARCN1P48444 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.29■□□□□ 0.68
ARCN1P48444 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARCN1P48444 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARCN1P48444 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARCN1P48444 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ARCN1P48444 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ARCN1P48444 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.29■□□□□ 0.68
ARCN1P48444 AC093827.2-201ENST00000512654 315 ntBASIC19.29■□□□□ 0.68
ARCN1P48444 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARCN1P48444 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.29■□□□□ 0.68
ARCN1P48444 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ARCN1P48444 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARCN1P48444 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARCN1P48444 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ARCN1P48444 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
ARCN1P48444 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ARCN1P48444 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.29■□□□□ 0.68
ARCN1P48444 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARCN1P48444 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ARCN1P48444 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.29■□□□□ 0.68
ARCN1P48444 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ARCN1P48444 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
ARCN1P48444 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARCN1P48444 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARCN1P48444 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARCN1P48444 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ARCN1P48444 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.28■□□□□ 0.68
ARCN1P48444 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.28■□□□□ 0.68
ARCN1P48444 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARCN1P48444 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARCN1P48444 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARCN1P48444 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARCN1P48444 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARCN1P48444 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARCN1P48444 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARCN1P48444 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.28■□□□□ 0.68
ARCN1P48444 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.28■□□□□ 0.68
ARCN1P48444 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ARCN1P48444 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.28■□□□□ 0.68
ARCN1P48444 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARCN1P48444 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.28■□□□□ 0.68
ARCN1P48444 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARCN1P48444 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
ARCN1P48444 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARCN1P48444 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.28■□□□□ 0.68
ARCN1P48444 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.28■□□□□ 0.68
ARCN1P48444 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ARCN1P48444 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ARCN1P48444 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARCN1P48444 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARCN1P48444 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
ARCN1P48444 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
ARCN1P48444 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARCN1P48444 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ARCN1P48444 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARCN1P48444 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARCN1P48444 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ARCN1P48444 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms