Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A3P43003 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A3P43003 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A3P43003 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SLC1A3P43003 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SLC1A3P43003 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A3P43003 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC1A3P43003 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
SLC1A3P43003 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A3P43003 LINC01465-201ENST00000408887 1940 ntBASIC17.71■□□□□ 0.43
SLC1A3P43003 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SLC1A3P43003 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A3P43003 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A3P43003 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A3P43003 TUBB8P6-201ENST00000436895 1288 ntBASIC17.71■□□□□ 0.43
SLC1A3P43003 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC1A3P43003 MTDHP1-201ENST00000605323 784 ntBASIC17.71■□□□□ 0.43
SLC1A3P43003 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.71■□□□□ 0.43
SLC1A3P43003 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A3P43003 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A3P43003 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SLC1A3P43003 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A3P43003 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A3P43003 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SLC1A3P43003 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SLC1A3P43003 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
SLC1A3P43003 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SLC1A3P43003 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A3P43003 NEFHP1-201ENST00000412845 2629 ntBASIC17.7■□□□□ 0.42
SLC1A3P43003 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A3P43003 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A3P43003 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A3P43003 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC1A3P43003 CD99P1-205ENST00000527459 561 ntBASIC17.7■□□□□ 0.42
SLC1A3P43003 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
SLC1A3P43003 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
SLC1A3P43003 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A3P43003 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A3P43003 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC1A3P43003 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A3P43003 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
SLC1A3P43003 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC1A3P43003 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A3P43003 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A3P43003 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A3P43003 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC1A3P43003 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC1A3P43003 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SLC1A3P43003 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SLC1A3P43003 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC1A3P43003 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC1A3P43003 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SLC1A3P43003 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC1A3P43003 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.69■□□□□ 0.42
SLC1A3P43003 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.69■□□□□ 0.42
SLC1A3P43003 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.69■□□□□ 0.42
SLC1A3P43003 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.69■□□□□ 0.42
SLC1A3P43003 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC1A3P43003 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC1A3P43003 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SLC1A3P43003 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC1A3P43003 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC1A3P43003 NBPF21P-201ENST00000425093 1451 ntBASIC17.69■□□□□ 0.42
SLC1A3P43003 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A3P43003 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A3P43003 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A3P43003 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A3P43003 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SLC1A3P43003 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A3P43003 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC1A3P43003 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SLC1A3P43003 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A3P43003 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A3P43003 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC1A3P43003 ZNF815P-204ENST00000434898 1737 ntBASIC17.68■□□□□ 0.42
SLC1A3P43003 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC1A3P43003 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A3P43003 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC1A3P43003 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC1A3P43003 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SLC1A3P43003 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SLC1A3P43003 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms