Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.88■□□□□ 0.93
TNFSF9P41273 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF9P41273 CRYGFP-201ENST00000418459 633 ntBASIC20.88■□□□□ 0.93
TNFSF9P41273 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF9P41273 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.88■□□□□ 0.93
TNFSF9P41273 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.88■□□□□ 0.93
TNFSF9P41273 SLC25A1P4-201ENST00000567977 778 ntBASIC20.88■□□□□ 0.93
TNFSF9P41273 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.88■□□□□ 0.93
TNFSF9P41273 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.88■□□□□ 0.93
TNFSF9P41273 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF9P41273 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNFSF9P41273 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF9P41273 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF9P41273 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF9P41273 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF9P41273 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF9P41273 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.87■□□□□ 0.93
TNFSF9P41273 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.87■□□□□ 0.93
TNFSF9P41273 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF9P41273 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TNFSF9P41273 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF9P41273 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF9P41273 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TNFSF9P41273 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.87■□□□□ 0.93
TNFSF9P41273 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.87■□□□□ 0.93
TNFSF9P41273 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF9P41273 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF9P41273 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TNFSF9P41273 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF9P41273 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF9P41273 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFSF9P41273 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF9P41273 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF9P41273 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.86■□□□□ 0.93
TNFSF9P41273 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.86■□□□□ 0.93
TNFSF9P41273 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
TNFSF9P41273 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF9P41273 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF9P41273 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF9P41273 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF9P41273 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TNFSF9P41273 AC211429.1-201ENST00000415277 523 ntBASIC20.86■□□□□ 0.93
TNFSF9P41273 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
TNFSF9P41273 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.86■□□□□ 0.93
TNFSF9P41273 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TNFSF9P41273 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.86■□□□□ 0.93
TNFSF9P41273 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.86■□□□□ 0.93
TNFSF9P41273 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
TNFSF9P41273 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF9P41273 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.86■□□□□ 0.93
TNFSF9P41273 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TNFSF9P41273 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF9P41273 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TNFSF9P41273 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF9P41273 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFSF9P41273 KRT8P11-201ENST00000409686 1436 ntBASIC20.86■□□□□ 0.93
TNFSF9P41273 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
TNFSF9P41273 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFSF9P41273 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF9P41273 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TNFSF9P41273 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.85■□□□□ 0.93
TNFSF9P41273 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFSF9P41273 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF9P41273 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TNFSF9P41273 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TNFSF9P41273 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFSF9P41273 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF9P41273 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TNFSF9P41273 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
TNFSF9P41273 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF9P41273 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFSF9P41273 MFAP1P1-201ENST00000442257 1255 ntBASIC20.85■□□□□ 0.93
TNFSF9P41273 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFSF9P41273 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFSF9P41273 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF9P41273 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.85■□□□□ 0.93
TNFSF9P41273 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.85■□□□□ 0.93
TNFSF9P41273 AC133561.5-201ENST00000635547 218 ntBASIC20.85■□□□□ 0.93
TNFSF9P41273 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFSF9P41273 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF9P41273 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF9P41273 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFSF9P41273 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFSF9P41273 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF9P41273 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF9P41273 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF9P41273 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF9P41273 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF9P41273 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF9P41273 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TNFSF9P41273 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
TNFSF9P41273 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFSF9P41273 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.85■□□□□ 0.93
TNFSF9P41273 AC096733.2-201ENST00000609937 1394 ntBASIC20.85■□□□□ 0.93
TNFSF9P41273 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF9P41273 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF9P41273 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF9P41273 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF9P41273 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TNFSF9P41273 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms