Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.37■□□□□ 0.69
CCNFP41002 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCNFP41002 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNFP41002 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.37■□□□□ 0.69
CCNFP41002 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNFP41002 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNFP41002 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNFP41002 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.37■□□□□ 0.69
CCNFP41002 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.37■□□□□ 0.69
CCNFP41002 UNC93B4-201ENST00000505679 747 ntBASIC19.37■□□□□ 0.69
CCNFP41002 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.37■□□□□ 0.69
CCNFP41002 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCNFP41002 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.37■□□□□ 0.69
CCNFP41002 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNFP41002 AC005082.1-201ENST00000413042 2259 ntBASIC19.37■□□□□ 0.69
CCNFP41002 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNFP41002 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CCNFP41002 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.37■□□□□ 0.69
CCNFP41002 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNFP41002 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCNFP41002 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCNFP41002 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.37■□□□□ 0.69
CCNFP41002 ZNF815P-204ENST00000434898 1737 ntBASIC19.37■□□□□ 0.69
CCNFP41002 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCNFP41002 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.36■□□□□ 0.69
CCNFP41002 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCNFP41002 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCNFP41002 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCNFP41002 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCNFP41002 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCNFP41002 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCNFP41002 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCNFP41002 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.36■□□□□ 0.69
CCNFP41002 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.36■□□□□ 0.69
CCNFP41002 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.36■□□□□ 0.69
CCNFP41002 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CCNFP41002 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.36■□□□□ 0.69
CCNFP41002 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCNFP41002 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCNFP41002 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.36■□□□□ 0.69
CCNFP41002 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCNFP41002 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCNFP41002 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.36■□□□□ 0.69
CCNFP41002 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCNFP41002 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.36■□□□□ 0.69
CCNFP41002 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCNFP41002 TFP1-202ENST00000475455 1573 ntBASIC19.36■□□□□ 0.69
CCNFP41002 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCNFP41002 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCNFP41002 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.35■□□□□ 0.69
CCNFP41002 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNFP41002 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNFP41002 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.35■□□□□ 0.69
CCNFP41002 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCNFP41002 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCNFP41002 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCNFP41002 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCNFP41002 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.35■□□□□ 0.69
CCNFP41002 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CCNFP41002 CD99P1-205ENST00000527459 561 ntBASIC19.35■□□□□ 0.69
CCNFP41002 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.35■□□□□ 0.69
CCNFP41002 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCNFP41002 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCNFP41002 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCNFP41002 AC008687.6-201ENST00000596318 630 ntBASIC19.35■□□□□ 0.69
CCNFP41002 AC120498.8-201ENST00000614275 531 ntBASIC19.35■□□□□ 0.69
CCNFP41002 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNFP41002 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNFP41002 AC093525.10-201ENST00000625130 1569 ntBASIC19.35■□□□□ 0.69
CCNFP41002 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNFP41002 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCNFP41002 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCNFP41002 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
CCNFP41002 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.35■□□□□ 0.69
CCNFP41002 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.35■□□□□ 0.69
CCNFP41002 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCNFP41002 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNFP41002 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCNFP41002 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.34■□□□□ 0.69
CCNFP41002 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CCNFP41002 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.34■□□□□ 0.69
CCNFP41002 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNFP41002 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.34■□□□□ 0.69
CCNFP41002 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.34■□□□□ 0.69
CCNFP41002 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.34■□□□□ 0.69
CCNFP41002 AP003097.1-201ENST00000530657 1135 ntBASIC19.34■□□□□ 0.69
CCNFP41002 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CCNFP41002 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.34■□□□□ 0.69
CCNFP41002 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CCNFP41002 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNFP41002 AL031598.1-201ENST00000561511 1773 ntBASIC19.34■□□□□ 0.69
CCNFP41002 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNFP41002 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCNFP41002 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCNFP41002 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CCNFP41002 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.69
CCNFP41002 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCNFP41002 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.33■□□□□ 0.69
CCNFP41002 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCNFP41002 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms