Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPH2P23942 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PRPH2P23942 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPH2P23942 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPH2P23942 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPH2P23942 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PRPH2P23942 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.35■□□□□ 0.53
PRPH2P23942 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.35■□□□□ 0.53
PRPH2P23942 Z98044.1-201ENST00000632503 1764 ntBASIC18.35■□□□□ 0.53
PRPH2P23942 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPH2P23942 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPH2P23942 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPH2P23942 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.35■□□□□ 0.53
PRPH2P23942 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPH2P23942 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPH2P23942 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPH2P23942 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPH2P23942 TSPY21P-201ENST00000433481 731 ntBASIC18.35■□□□□ 0.53
PRPH2P23942 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPH2P23942 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.35■□□□□ 0.53
PRPH2P23942 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.35■□□□□ 0.53
PRPH2P23942 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPH2P23942 HLA-A-209ENST00000638375 975 ntBASIC18.35■□□□□ 0.53
PRPH2P23942 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPH2P23942 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPH2P23942 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
PRPH2P23942 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPH2P23942 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPH2P23942 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPH2P23942 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPH2P23942 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
PRPH2P23942 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPH2P23942 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.35■□□□□ 0.53
PRPH2P23942 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPH2P23942 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPH2P23942 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPH2P23942 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPH2P23942 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPH2P23942 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPH2P23942 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRPH2P23942 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRPH2P23942 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPH2P23942 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPH2P23942 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.34■□□□□ 0.53
PRPH2P23942 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPH2P23942 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.34■□□□□ 0.53
PRPH2P23942 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRPH2P23942 AL160286.2-201ENST00000567150 934 ntBASIC18.34■□□□□ 0.53
PRPH2P23942 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPH2P23942 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPH2P23942 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPH2P23942 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPH2P23942 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPH2P23942 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PRPH2P23942 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPH2P23942 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PRPH2P23942 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRPH2P23942 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PRPH2P23942 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PRPH2P23942 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRPH2P23942 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PRPH2P23942 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.33■□□□□ 0.53
PRPH2P23942 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.33■□□□□ 0.53
PRPH2P23942 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.33■□□□□ 0.53
PRPH2P23942 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PRPH2P23942 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPH2P23942 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.33■□□□□ 0.52
PRPH2P23942 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPH2P23942 AL355802.2-201ENST00000402069 882 ntBASIC18.33■□□□□ 0.52
PRPH2P23942 AP003097.1-201ENST00000530657 1135 ntBASIC18.33■□□□□ 0.52
PRPH2P23942 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.33■□□□□ 0.52
PRPH2P23942 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.33■□□□□ 0.52
PRPH2P23942 MTDHP1-201ENST00000605323 784 ntBASIC18.33■□□□□ 0.52
PRPH2P23942 AC004264.1-201ENST00000608354 794 ntBASIC18.33■□□□□ 0.52
PRPH2P23942 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRPH2P23942 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PRPH2P23942 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PRPH2P23942 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPH2P23942 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPH2P23942 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPH2P23942 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPH2P23942 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PRPH2P23942 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.33■□□□□ 0.52
PRPH2P23942 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPH2P23942 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
PRPH2P23942 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.33■□□□□ 0.52
PRPH2P23942 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.33■□□□□ 0.52
PRPH2P23942 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PRPH2P23942 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPH2P23942 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRPH2P23942 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.32■□□□□ 0.52
PRPH2P23942 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRPH2P23942 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.32■□□□□ 0.52
PRPH2P23942 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRPH2P23942 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.32■□□□□ 0.52
PRPH2P23942 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRPH2P23942 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRPH2P23942 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PRPH2P23942 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRPH2P23942 HLA-L-209ENST00000420110 1011 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms