Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKCAP17252 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKCAP17252 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKCAP17252 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.81■□□□□ 0.44
PRKCAP17252 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.81■□□□□ 0.44
PRKCAP17252 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKCAP17252 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKCAP17252 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKCAP17252 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKCAP17252 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.81■□□□□ 0.44
PRKCAP17252 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.81■□□□□ 0.44
PRKCAP17252 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.81■□□□□ 0.44
PRKCAP17252 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKCAP17252 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKCAP17252 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKCAP17252 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.81■□□□□ 0.44
PRKCAP17252 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.81■□□□□ 0.44
PRKCAP17252 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
PRKCAP17252 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.81■□□□□ 0.44
PRKCAP17252 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRKCAP17252 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.81■□□□□ 0.44
PRKCAP17252 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRKCAP17252 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.81■□□□□ 0.44
PRKCAP17252 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRKCAP17252 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRKCAP17252 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRKCAP17252 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PRKCAP17252 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.8■□□□□ 0.44
PRKCAP17252 YBX1P10-201ENST00000444752 975 ntBASIC17.8■□□□□ 0.44
PRKCAP17252 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.8■□□□□ 0.44
PRKCAP17252 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRKCAP17252 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRKCAP17252 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRKCAP17252 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRKCAP17252 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.8■□□□□ 0.44
PRKCAP17252 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.8■□□□□ 0.44
PRKCAP17252 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRKCAP17252 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PRKCAP17252 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRKCAP17252 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PRKCAP17252 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
PRKCAP17252 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PRKCAP17252 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PRKCAP17252 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRKCAP17252 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRKCAP17252 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRKCAP17252 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRKCAP17252 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRKCAP17252 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.79■□□□□ 0.44
PRKCAP17252 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.79■□□□□ 0.44
PRKCAP17252 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.79■□□□□ 0.44
PRKCAP17252 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PRKCAP17252 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.79■□□□□ 0.44
PRKCAP17252 RN7SL471P-201ENST00000580476 299 ntBASIC17.79■□□□□ 0.44
PRKCAP17252 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.79■□□□□ 0.44
PRKCAP17252 ITM2C-210ENST00000620962 501 ntBASIC17.79■□□□□ 0.44
PRKCAP17252 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PRKCAP17252 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRKCAP17252 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRKCAP17252 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRKCAP17252 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PRKCAP17252 TREX1-205ENST00000625293 1783 ntBASIC17.79■□□□□ 0.44
PRKCAP17252 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PRKCAP17252 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PRKCAP17252 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRKCAP17252 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRKCAP17252 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRKCAP17252 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.78■□□□□ 0.44
PRKCAP17252 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRKCAP17252 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRKCAP17252 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.78■□□□□ 0.44
PRKCAP17252 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRKCAP17252 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.78■□□□□ 0.44
PRKCAP17252 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRKCAP17252 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.78■□□□□ 0.44
PRKCAP17252 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.78■□□□□ 0.44
PRKCAP17252 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRKCAP17252 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRKCAP17252 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.78■□□□□ 0.44
PRKCAP17252 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.78■□□□□ 0.44
PRKCAP17252 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.78■□□□□ 0.44
PRKCAP17252 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.78■□□□□ 0.44
PRKCAP17252 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRKCAP17252 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.78■□□□□ 0.44
PRKCAP17252 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRKCAP17252 AL023875.1-201ENST00000640777 796 ntBASIC17.78■□□□□ 0.44
PRKCAP17252 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRKCAP17252 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
PRKCAP17252 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRKCAP17252 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.78■□□□□ 0.44
PRKCAP17252 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.78■□□□□ 0.44
PRKCAP17252 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRKCAP17252 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.78■□□□□ 0.44
PRKCAP17252 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRKCAP17252 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.78■□□□□ 0.44
PRKCAP17252 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PRKCAP17252 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRKCAP17252 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
PRKCAP17252 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.77■□□□□ 0.44
PRKCAP17252 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms