Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.51■□□□□ 0.39
FREM3P0C091 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
FREM3P0C091 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.51■□□□□ 0.39
FREM3P0C091 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FREM3P0C091 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FREM3P0C091 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FREM3P0C091 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
FREM3P0C091 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FREM3P0C091 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.5■□□□□ 0.39
FREM3P0C091 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
FREM3P0C091 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
FREM3P0C091 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
FREM3P0C091 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FREM3P0C091 MESTP1-201ENST00000404287 994 ntBASIC17.5■□□□□ 0.39
FREM3P0C091 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
FREM3P0C091 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FREM3P0C091 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.5■□□□□ 0.39
FREM3P0C091 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.5■□□□□ 0.39
FREM3P0C091 AC131212.4-201ENST00000623606 975 ntBASIC17.5■□□□□ 0.39
FREM3P0C091 AC097493.4-201ENST00000641197 219 ntBASIC17.5■□□□□ 0.39
FREM3P0C091 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.5■□□□□ 0.39
FREM3P0C091 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FREM3P0C091 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FREM3P0C091 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.5■□□□□ 0.39
FREM3P0C091 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
FREM3P0C091 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
FREM3P0C091 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FREM3P0C091 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.5■□□□□ 0.39
FREM3P0C091 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.5■□□□□ 0.39
FREM3P0C091 AC010947.1-201ENST00000623454 693 ntBASIC17.5■□□□□ 0.39
FREM3P0C091 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
FREM3P0C091 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FREM3P0C091 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
FREM3P0C091 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.49■□□□□ 0.39
FREM3P0C091 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FREM3P0C091 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
FREM3P0C091 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
FREM3P0C091 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FREM3P0C091 ZNF815P-204ENST00000434898 1737 ntBASIC17.49■□□□□ 0.39
FREM3P0C091 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FREM3P0C091 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FREM3P0C091 FAM207BP-201ENST00000447172 505 ntBASIC17.49■□□□□ 0.39
FREM3P0C091 AC091390.4-202ENST00000476426 537 ntBASIC17.49■□□□□ 0.39
FREM3P0C091 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.49■□□□□ 0.39
FREM3P0C091 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
FREM3P0C091 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.49■□□□□ 0.39
FREM3P0C091 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
FREM3P0C091 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FREM3P0C091 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.49■□□□□ 0.39
FREM3P0C091 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FREM3P0C091 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.49■□□□□ 0.39
FREM3P0C091 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FREM3P0C091 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FREM3P0C091 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FREM3P0C091 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FREM3P0C091 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.49■□□□□ 0.39
FREM3P0C091 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
FREM3P0C091 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
FREM3P0C091 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.48■□□□□ 0.39
FREM3P0C091 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.48■□□□□ 0.39
FREM3P0C091 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FREM3P0C091 RCN1P1-201ENST00000400413 996 ntBASIC17.48■□□□□ 0.39
FREM3P0C091 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
FREM3P0C091 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
FREM3P0C091 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
FREM3P0C091 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FREM3P0C091 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
FREM3P0C091 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.48■□□□□ 0.39
FREM3P0C091 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FREM3P0C091 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.48■□□□□ 0.39
FREM3P0C091 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
FREM3P0C091 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.48■□□□□ 0.39
FREM3P0C091 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
FREM3P0C091 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FREM3P0C091 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
FREM3P0C091 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.48■□□□□ 0.39
FREM3P0C091 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FREM3P0C091 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FREM3P0C091 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
FREM3P0C091 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
FREM3P0C091 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.48■□□□□ 0.39
FREM3P0C091 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.48■□□□□ 0.39
FREM3P0C091 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
FREM3P0C091 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.48■□□□□ 0.39
FREM3P0C091 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.48■□□□□ 0.39
FREM3P0C091 AP000525.1-201ENST00000608286 694 ntBASIC17.48■□□□□ 0.39
FREM3P0C091 DGCR10-201ENST00000609839 495 ntBASIC17.48■□□□□ 0.39
FREM3P0C091 AC093484.2-201ENST00000580996 2166 ntBASIC17.48■□□□□ 0.39
FREM3P0C091 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FREM3P0C091 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.48■□□□□ 0.39
FREM3P0C091 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
FREM3P0C091 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.47■□□□□ 0.39
FREM3P0C091 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.47■□□□□ 0.39
FREM3P0C091 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
FREM3P0C091 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
FREM3P0C091 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.47■□□□□ 0.39
FREM3P0C091 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.47■□□□□ 0.39
FREM3P0C091 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
FREM3P0C091 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.47■□□□□ 0.39
FREM3P0C091 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms