Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC004951.3-201ENST00000418645 1148 ntBASIC19.45■□□□□ 0.7
RETP07949 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RETP07949 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
RETP07949 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.45■□□□□ 0.7
RETP07949 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.45■□□□□ 0.7
RETP07949 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.45■□□□□ 0.7
RETP07949 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RETP07949 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.45■□□□□ 0.7
RETP07949 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RETP07949 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.45■□□□□ 0.7
RETP07949 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RETP07949 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
RETP07949 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RETP07949 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.45■□□□□ 0.7
RETP07949 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RETP07949 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.45■□□□□ 0.7
RETP07949 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RETP07949 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RETP07949 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RETP07949 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RETP07949 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.44■□□□□ 0.7
RETP07949 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RETP07949 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RETP07949 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RETP07949 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RETP07949 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.44■□□□□ 0.7
RETP07949 TUBB8P6-201ENST00000436895 1288 ntBASIC19.44■□□□□ 0.7
RETP07949 YBX1P10-201ENST00000444752 975 ntBASIC19.44■□□□□ 0.7
RETP07949 AL359075.1-203ENST00000462729 1002 ntBASIC19.44■□□□□ 0.7
RETP07949 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RETP07949 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
RETP07949 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RETP07949 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RETP07949 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RETP07949 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RETP07949 AFG3L1P-217ENST00000557444 2447 ntBASIC19.44■□□□□ 0.7
RETP07949 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RETP07949 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.44■□□□□ 0.7
RETP07949 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RETP07949 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RETP07949 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RETP07949 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RETP07949 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RETP07949 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RETP07949 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RETP07949 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.43■□□□□ 0.7
RETP07949 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RETP07949 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RETP07949 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.43■□□□□ 0.7
RETP07949 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RETP07949 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.43■□□□□ 0.7
RETP07949 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.43■□□□□ 0.7
RETP07949 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RETP07949 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RETP07949 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RETP07949 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RETP07949 TSPY17P-201ENST00000450329 467 ntBASIC19.43■□□□□ 0.7
RETP07949 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.43■□□□□ 0.7
RETP07949 KRT18P16-201ENST00000510337 1294 ntBASIC19.43■□□□□ 0.7
RETP07949 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.43■□□□□ 0.7
RETP07949 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.43■□□□□ 0.7
RETP07949 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.43■□□□□ 0.7
RETP07949 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RETP07949 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.43■□□□□ 0.7
RETP07949 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.43■□□□□ 0.7
RETP07949 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RETP07949 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RETP07949 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RETP07949 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RETP07949 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.42■□□□□ 0.7
RETP07949 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.42■□□□□ 0.7
RETP07949 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RETP07949 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RETP07949 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RETP07949 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RETP07949 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RETP07949 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RETP07949 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.42■□□□□ 0.7
RETP07949 AC008040.2-201ENST00000461049 708 ntBASIC19.42■□□□□ 0.7
RETP07949 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.42■□□□□ 0.7
RETP07949 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.42■□□□□ 0.7
RETP07949 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RETP07949 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.42■□□□□ 0.7
RETP07949 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.42■□□□□ 0.7
RETP07949 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RETP07949 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RETP07949 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.42■□□□□ 0.7
RETP07949 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RETP07949 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RETP07949 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RETP07949 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RETP07949 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RETP07949 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RETP07949 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RETP07949 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RETP07949 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.41■□□□□ 0.7
RETP07949 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RETP07949 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.41■□□□□ 0.7
RETP07949 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.41■□□□□ 0.7
RETP07949 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms