Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.44■□□□□ 0.38
HMGN1P05114 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HMGN1P05114 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGN1P05114 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGN1P05114 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGN1P05114 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.44■□□□□ 0.38
HMGN1P05114 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGN1P05114 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HMGN1P05114 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HMGN1P05114 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
HMGN1P05114 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGN1P05114 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HMGN1P05114 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN1P05114 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN1P05114 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGN1P05114 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
HMGN1P05114 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGN1P05114 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HMGN1P05114 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN1P05114 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGN1P05114 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGN1P05114 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN1P05114 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
HMGN1P05114 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGN1P05114 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN1P05114 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN1P05114 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN1P05114 AC133552.2-202ENST00000575694 574 ntBASIC17.43■□□□□ 0.38
HMGN1P05114 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HMGN1P05114 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGN1P05114 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN1P05114 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HMGN1P05114 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGN1P05114 AC093525.10-201ENST00000625130 1569 ntBASIC17.43■□□□□ 0.38
HMGN1P05114 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGN1P05114 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN1P05114 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.43■□□□□ 0.38
HMGN1P05114 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.43■□□□□ 0.38
HMGN1P05114 Z98044.1-201ENST00000632503 1764 ntBASIC17.43■□□□□ 0.38
HMGN1P05114 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.43■□□□□ 0.38
HMGN1P05114 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN1P05114 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HMGN1P05114 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN1P05114 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN1P05114 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN1P05114 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.42■□□□□ 0.38
HMGN1P05114 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN1P05114 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.42■□□□□ 0.38
HMGN1P05114 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN1P05114 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HMGN1P05114 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN1P05114 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN1P05114 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN1P05114 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN1P05114 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.42■□□□□ 0.38
HMGN1P05114 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN1P05114 AC005829.2-201ENST00000571422 1056 ntBASIC17.42■□□□□ 0.38
HMGN1P05114 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN1P05114 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN1P05114 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HMGN1P05114 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN1P05114 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HMGN1P05114 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HMGN1P05114 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.41■□□□□ 0.38
HMGN1P05114 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGN1P05114 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGN1P05114 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGN1P05114 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGN1P05114 AL031598.1-201ENST00000561511 1773 ntBASIC17.41■□□□□ 0.38
HMGN1P05114 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HMGN1P05114 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.41■□□□□ 0.38
HMGN1P05114 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
HMGN1P05114 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.41■□□□□ 0.38
HMGN1P05114 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HMGN1P05114 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.41■□□□□ 0.38
HMGN1P05114 IRX1P1-201ENST00000438849 1838 ntBASIC17.41■□□□□ 0.38
HMGN1P05114 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HMGN1P05114 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
HMGN1P05114 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.41■□□□□ 0.38
HMGN1P05114 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HMGN1P05114 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HMGN1P05114 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms