Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04436 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.62■□□□□ 0.41
P04436 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P04436 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04436 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.62■□□□□ 0.41
P04436 AC008040.2-201ENST00000461049 708 ntBASIC17.62■□□□□ 0.41
P04436 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.62■□□□□ 0.41
P04436 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.62■□□□□ 0.41
P04436 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04436 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
P04436 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.62■□□□□ 0.41
P04436 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
P04436 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
P04436 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P04436 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
P04436 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.62■□□□□ 0.41
P04436 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04436 PCDHAC2-203ENST00000615316 3011 ntBASIC17.62■□□□□ 0.41
P04436 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.62■□□□□ 0.41
P04436 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.62■□□□□ 0.41
P04436 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.62■□□□□ 0.41
P04436 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
P04436 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04436 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P04436 ZNF815P-204ENST00000434898 1737 ntBASIC17.61■□□□□ 0.41
P04436 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P04436 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04436 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
P04436 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
P04436 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04436 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04436 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04436 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
P04436 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
P04436 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.61■□□□□ 0.41
P04436 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.61■□□□□ 0.41
P04436 MFAP1P1-201ENST00000442257 1255 ntBASIC17.61■□□□□ 0.41
P04436 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
P04436 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04436 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P04436 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
P04436 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
P04436 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04436 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.61■□□□□ 0.41
P04436 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04436 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04436 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
P04436 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.61■□□□□ 0.41
P04436 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P04436 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P04436 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
P04436 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
P04436 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
P04436 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.6■□□□□ 0.41
P04436 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.6■□□□□ 0.41
P04436 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
P04436 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.6■□□□□ 0.41
P04436 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.6■□□□□ 0.41
P04436 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.6■□□□□ 0.41
P04436 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.6■□□□□ 0.41
P04436 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.6■□□□□ 0.41
P04436 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.6■□□□□ 0.41
P04436 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.6■□□□□ 0.41
P04436 AC145285.6-201ENST00000604632 637 ntBASIC17.6■□□□□ 0.41
P04436 AC012306.2-201ENST00000609350 630 ntBASIC17.6■□□□□ 0.41
P04436 KRT18P22-201ENST00000402024 1347 ntBASIC17.6■□□□□ 0.41
P04436 CYP2D8P-201ENST00000433633 1490 ntBASIC17.6■□□□□ 0.41
P04436 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.6■□□□□ 0.41
P04436 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.6■□□□□ 0.41
P04436 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P04436 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04436 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P04436 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.59■□□□□ 0.41
P04436 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.59■□□□□ 0.41
P04436 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04436 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
P04436 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.59■□□□□ 0.41
P04436 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P04436 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.59■□□□□ 0.41
P04436 AC096733.2-201ENST00000609937 1394 ntBASIC17.59■□□□□ 0.41
P04436 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P04436 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms