Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 TSPY17P-201ENST00000450329 467 ntBASIC21.15■□□□□ 0.98
VTNP04004 AL353719.1-201ENST00000566847 864 ntBASIC21.15■□□□□ 0.98
VTNP04004 WWOX-216ENST00000569818 525 ntBASIC21.15■□□□□ 0.98
VTNP04004 AC010653.2-201ENST00000623505 997 ntBASIC21.15■□□□□ 0.98
VTNP04004 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VTNP04004 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VTNP04004 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.15■□□□□ 0.98
VTNP04004 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VTNP04004 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VTNP04004 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
VTNP04004 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.14■□□□□ 0.98
VTNP04004 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
VTNP04004 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
VTNP04004 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
VTNP04004 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
VTNP04004 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VTNP04004 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
VTNP04004 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.14■□□□□ 0.97
VTNP04004 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.14■□□□□ 0.97
VTNP04004 NTF6B-201ENST00000591913 560 ntBASIC21.14■□□□□ 0.97
VTNP04004 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VTNP04004 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VTNP04004 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.14■□□□□ 0.97
VTNP04004 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
VTNP04004 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VTNP04004 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VTNP04004 SDHAP1-207ENST00000440850 2000 ntBASIC21.14■□□□□ 0.97
VTNP04004 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.97
VTNP04004 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VTNP04004 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VTNP04004 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.14■□□□□ 0.97
VTNP04004 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
VTNP04004 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VTNP04004 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VTNP04004 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.13■□□□□ 0.97
VTNP04004 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.13■□□□□ 0.97
VTNP04004 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VTNP04004 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
VTNP04004 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
VTNP04004 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
VTNP04004 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
VTNP04004 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VTNP04004 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VTNP04004 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
VTNP04004 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VTNP04004 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VTNP04004 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.13■□□□□ 0.97
VTNP04004 BX664615.1-201ENST00000443558 458 ntBASIC21.13■□□□□ 0.97
VTNP04004 CA15P1-201ENST00000481698 905 ntBASIC21.13■□□□□ 0.97
VTNP04004 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.13■□□□□ 0.97
VTNP04004 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.13■□□□□ 0.97
VTNP04004 AL138966.2-201ENST00000621997 464 ntBASIC21.13■□□□□ 0.97
VTNP04004 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.13■□□□□ 0.97
VTNP04004 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VTNP04004 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VTNP04004 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.13■□□□□ 0.97
VTNP04004 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VTNP04004 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
VTNP04004 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VTNP04004 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.12■□□□□ 0.97
VTNP04004 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
VTNP04004 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VTNP04004 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VTNP04004 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VTNP04004 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
VTNP04004 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VTNP04004 AK4P3-201ENST00000418260 669 ntBASIC21.12■□□□□ 0.97
VTNP04004 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.12■□□□□ 0.97
VTNP04004 AC117947.1-201ENST00000427448 529 ntBASIC21.12■□□□□ 0.97
VTNP04004 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.12■□□□□ 0.97
VTNP04004 PRSS44-201ENST00000515154 1146 ntBASIC21.12■□□□□ 0.97
VTNP04004 AP003041.3-201ENST00000527151 707 ntBASIC21.12■□□□□ 0.97
VTNP04004 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.12■□□□□ 0.97
VTNP04004 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
VTNP04004 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VTNP04004 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VTNP04004 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
VTNP04004 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.12■□□□□ 0.97
VTNP04004 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.12■□□□□ 0.97
VTNP04004 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
VTNP04004 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.11■□□□□ 0.97
VTNP04004 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.11■□□□□ 0.97
VTNP04004 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VTNP04004 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VTNP04004 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VTNP04004 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.11■□□□□ 0.97
VTNP04004 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VTNP04004 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
VTNP04004 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.11■□□□□ 0.97
VTNP04004 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.11■□□□□ 0.97
VTNP04004 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VTNP04004 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
VTNP04004 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
VTNP04004 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.11■□□□□ 0.97
VTNP04004 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.11■□□□□ 0.97
VTNP04004 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.11■□□□□ 0.97
VTNP04004 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.11■□□□□ 0.97
VTNP04004 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
VTNP04004 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.11■□□□□ 0.97
VTNP04004 AC139887.4-201ENST00000607877 719 ntBASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms