Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.31■■□□□ 1
CD4P01730 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CD4P01730 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CD4P01730 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.31■■□□□ 1
CD4P01730 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.31■■□□□ 1
CD4P01730 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CD4P01730 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
CD4P01730 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CD4P01730 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.3■■□□□ 1
CD4P01730 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CD4P01730 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CD4P01730 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CD4P01730 STARP1-201ENST00000397973 869 ntBASIC21.3■■□□□ 1
CD4P01730 AP000523.1-201ENST00000398242 1049 ntBASIC21.3■■□□□ 1
CD4P01730 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.3■■□□□ 1
CD4P01730 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.3■■□□□ 1
CD4P01730 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.3■■□□□ 1
CD4P01730 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.3■■□□□ 1
CD4P01730 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.3■■□□□ 1
CD4P01730 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CD4P01730 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.3■■□□□ 1
CD4P01730 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CD4P01730 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.29■■□□□ 1
CD4P01730 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CD4P01730 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CD4P01730 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CD4P01730 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.29■■□□□ 1
CD4P01730 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.29■■□□□ 1
CD4P01730 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.29■■□□□ 1
CD4P01730 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CD4P01730 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.29■■□□□ 1
CD4P01730 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.29■■□□□ 1
CD4P01730 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.29■■□□□ 1
CD4P01730 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.29■■□□□ 1
CD4P01730 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CD4P01730 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.29■■□□□ 1
CD4P01730 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.29■■□□□ 1
CD4P01730 NEK4P2-201ENST00000580004 1012 ntBASIC21.29■■□□□ 1
CD4P01730 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.29■■□□□ 1
CD4P01730 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CD4P01730 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.29■■□□□ 1
CD4P01730 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CD4P01730 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.29■■□□□ 1
CD4P01730 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CD4P01730 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CD4P01730 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.29■■□□□ 1
CD4P01730 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.29■■□□□ 1
CD4P01730 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.28■■□□□ 1
CD4P01730 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CD4P01730 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.28■■□□□ 1
CD4P01730 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CD4P01730 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CD4P01730 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CD4P01730 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.28■■□□□ 1
CD4P01730 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CD4P01730 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CD4P01730 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.28■■□□□ 1
CD4P01730 ATP5G2P1-201ENST00000433580 426 ntBASIC21.28■■□□□ 1
CD4P01730 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.28■■□□□ 1
CD4P01730 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.28■■□□□ 1
CD4P01730 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.28■■□□□ 1
CD4P01730 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CD4P01730 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.28■■□□□ 1
CD4P01730 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CD4P01730 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CD4P01730 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.28■■□□□ 1
CD4P01730 AP001271.2-201ENST00000624018 1556 ntBASIC21.27■■□□□ 1
CD4P01730 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CD4P01730 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD4P01730 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.27■■□□□ 1
CD4P01730 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CD4P01730 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.27■■□□□ 1
CD4P01730 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD4P01730 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD4P01730 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD4P01730 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD4P01730 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.27■■□□□ 1
CD4P01730 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
CD4P01730 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CD4P01730 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.27■■□□□ 1
CD4P01730 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.27■□□□□ 0.99
CD4P01730 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CD4P01730 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CD4P01730 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.27■□□□□ 0.99
CD4P01730 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD4P01730 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD4P01730 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.26■□□□□ 0.99
CD4P01730 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD4P01730 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.26■□□□□ 0.99
CD4P01730 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CD4P01730 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CD4P01730 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CD4P01730 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.26■□□□□ 0.99
CD4P01730 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.26■□□□□ 0.99
CD4P01730 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD4P01730 GCSHP2-201ENST00000560971 527 ntBASIC21.26■□□□□ 0.99
CD4P01730 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CD4P01730 AC012313.10-201ENST00000623509 926 ntBASIC21.26■□□□□ 0.99
CD4P01730 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.26■□□□□ 0.99
CD4P01730 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms