Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CLPTM1O96005 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLPTM1O96005 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLPTM1O96005 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.14■□□□□ 0.49
CLPTM1O96005 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.14■□□□□ 0.49
CLPTM1O96005 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.14■□□□□ 0.49
CLPTM1O96005 AC053503.5-201ENST00000601508 636 ntBASIC18.14■□□□□ 0.49
CLPTM1O96005 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.14■□□□□ 0.49
CLPTM1O96005 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.14■□□□□ 0.49
CLPTM1O96005 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.14■□□□□ 0.49
CLPTM1O96005 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.14■□□□□ 0.49
CLPTM1O96005 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLPTM1O96005 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLPTM1O96005 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLPTM1O96005 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLPTM1O96005 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPTM1O96005 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.13■□□□□ 0.49
CLPTM1O96005 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPTM1O96005 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLPTM1O96005 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLPTM1O96005 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPTM1O96005 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPTM1O96005 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPTM1O96005 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLPTM1O96005 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.13■□□□□ 0.49
CLPTM1O96005 AC016769.1-201ENST00000409132 1010 ntBASIC18.13■□□□□ 0.49
CLPTM1O96005 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.13■□□□□ 0.49
CLPTM1O96005 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.13■□□□□ 0.49
CLPTM1O96005 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.13■□□□□ 0.49
CLPTM1O96005 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.13■□□□□ 0.49
CLPTM1O96005 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLPTM1O96005 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPTM1O96005 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPTM1O96005 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPTM1O96005 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.13■□□□□ 0.49
CLPTM1O96005 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPTM1O96005 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.13■□□□□ 0.49
CLPTM1O96005 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPTM1O96005 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPTM1O96005 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPTM1O96005 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CLPTM1O96005 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLPTM1O96005 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.13■□□□□ 0.49
CLPTM1O96005 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.13■□□□□ 0.49
CLPTM1O96005 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CLPTM1O96005 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPTM1O96005 AC009053.2-201ENST00000563701 2365 ntBASIC18.12■□□□□ 0.49
CLPTM1O96005 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPTM1O96005 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPTM1O96005 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPTM1O96005 AL031598.1-201ENST00000561511 1773 ntBASIC18.12■□□□□ 0.49
CLPTM1O96005 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.12■□□□□ 0.49
CLPTM1O96005 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLPTM1O96005 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CLPTM1O96005 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLPTM1O96005 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPTM1O96005 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPTM1O96005 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPTM1O96005 AC004911.1-201ENST00000416316 871 ntBASIC18.12■□□□□ 0.49
CLPTM1O96005 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.12■□□□□ 0.49
CLPTM1O96005 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.12■□□□□ 0.49
CLPTM1O96005 AC138907.5-202ENST00000569484 235 ntBASIC18.12■□□□□ 0.49
CLPTM1O96005 AL137784.2-201ENST00000607332 1000 ntBASIC18.12■□□□□ 0.49
CLPTM1O96005 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPTM1O96005 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPTM1O96005 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPTM1O96005 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLPTM1O96005 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPTM1O96005 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPTM1O96005 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPTM1O96005 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLPTM1O96005 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.12■□□□□ 0.49
CLPTM1O96005 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLPTM1O96005 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLPTM1O96005 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLPTM1O96005 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPTM1O96005 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CLPTM1O96005 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLPTM1O96005 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLPTM1O96005 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLPTM1O96005 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPTM1O96005 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.11■□□□□ 0.49
CLPTM1O96005 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.11■□□□□ 0.49
CLPTM1O96005 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPTM1O96005 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLPTM1O96005 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPTM1O96005 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.11■□□□□ 0.49
CLPTM1O96005 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.11■□□□□ 0.49
CLPTM1O96005 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.11■□□□□ 0.49
CLPTM1O96005 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.11■□□□□ 0.49
CLPTM1O96005 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLPTM1O96005 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLPTM1O96005 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPTM1O96005 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLPTM1O96005 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLPTM1O96005 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.11■□□□□ 0.49
CLPTM1O96005 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLPTM1O96005 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPTM1O96005 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLPTM1O96005 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms