Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.21■□□□□ 0.83
TRUB2O95900 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.21■□□□□ 0.83
TRUB2O95900 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.21■□□□□ 0.83
TRUB2O95900 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.21■□□□□ 0.83
TRUB2O95900 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRUB2O95900 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRUB2O95900 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRUB2O95900 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRUB2O95900 BX323043.1-201ENST00000641006 1765 ntBASIC20.21■□□□□ 0.83
TRUB2O95900 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
TRUB2O95900 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.21■□□□□ 0.83
TRUB2O95900 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB2O95900 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB2O95900 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB2O95900 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB2O95900 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB2O95900 AC018445.3-201ENST00000624177 1945 ntBASIC20.2■□□□□ 0.82
TRUB2O95900 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB2O95900 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB2O95900 FAM197Y1-201ENST00000421178 764 ntBASIC20.2■□□□□ 0.82
TRUB2O95900 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB2O95900 CR392000.1-201ENST00000624770 1228 ntBASIC20.2■□□□□ 0.82
TRUB2O95900 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB2O95900 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB2O95900 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.2■□□□□ 0.82
TRUB2O95900 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB2O95900 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB2O95900 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB2O95900 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRUB2O95900 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRUB2O95900 LINC01465-201ENST00000408887 1940 ntBASIC20.19■□□□□ 0.82
TRUB2O95900 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRUB2O95900 KRT16P1-201ENST00000399124 1418 ntBASIC20.19■□□□□ 0.82
TRUB2O95900 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRUB2O95900 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.19■□□□□ 0.82
TRUB2O95900 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRUB2O95900 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.19■□□□□ 0.82
TRUB2O95900 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRUB2O95900 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.19■□□□□ 0.82
TRUB2O95900 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TRUB2O95900 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRUB2O95900 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRUB2O95900 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
TRUB2O95900 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.19■□□□□ 0.82
TRUB2O95900 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
TRUB2O95900 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.19■□□□□ 0.82
TRUB2O95900 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.19■□□□□ 0.82
TRUB2O95900 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.19■□□□□ 0.82
TRUB2O95900 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.19■□□□□ 0.82
TRUB2O95900 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.19■□□□□ 0.82
TRUB2O95900 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.19■□□□□ 0.82
TRUB2O95900 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.19■□□□□ 0.82
TRUB2O95900 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRUB2O95900 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.19■□□□□ 0.82
TRUB2O95900 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRUB2O95900 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.19■□□□□ 0.82
TRUB2O95900 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRUB2O95900 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRUB2O95900 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRUB2O95900 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRUB2O95900 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
TRUB2O95900 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRUB2O95900 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRUB2O95900 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.18■□□□□ 0.82
TRUB2O95900 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRUB2O95900 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.18■□□□□ 0.82
TRUB2O95900 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRUB2O95900 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRUB2O95900 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRUB2O95900 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRUB2O95900 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.18■□□□□ 0.82
TRUB2O95900 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.18■□□□□ 0.82
TRUB2O95900 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.18■□□□□ 0.82
TRUB2O95900 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.18■□□□□ 0.82
TRUB2O95900 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRUB2O95900 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRUB2O95900 AC087289.5-201ENST00000586076 3175 ntBASIC20.18■□□□□ 0.82
TRUB2O95900 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRUB2O95900 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.18■□□□□ 0.82
TRUB2O95900 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRUB2O95900 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.18■□□□□ 0.82
TRUB2O95900 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRUB2O95900 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRUB2O95900 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.17■□□□□ 0.82
TRUB2O95900 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRUB2O95900 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRUB2O95900 SDHAP1-207ENST00000440850 2000 ntBASIC20.17■□□□□ 0.82
TRUB2O95900 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.17■□□□□ 0.82
TRUB2O95900 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRUB2O95900 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRUB2O95900 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
TRUB2O95900 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.17■□□□□ 0.82
TRUB2O95900 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.17■□□□□ 0.82
TRUB2O95900 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TRUB2O95900 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.17■□□□□ 0.82
TRUB2O95900 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRUB2O95900 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.17■□□□□ 0.82
TRUB2O95900 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.17■□□□□ 0.82
TRUB2O95900 SNORA78-201ENST00000459373 127 ntBASIC20.17■□□□□ 0.82
TRUB2O95900 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms