Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.47■□□□□ 0.39
CLPXO76031 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CLPXO76031 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPXO76031 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPXO76031 AC124067.4-201ENST00000519691 2379 ntBASIC17.47■□□□□ 0.39
CLPXO76031 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLPXO76031 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CLPXO76031 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPXO76031 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPXO76031 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLPXO76031 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.47■□□□□ 0.39
CLPXO76031 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPXO76031 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.47■□□□□ 0.39
CLPXO76031 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.47■□□□□ 0.39
CLPXO76031 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLPXO76031 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CLPXO76031 ABALON-201ENST00000629058 1903 ntBASIC17.47■□□□□ 0.39
CLPXO76031 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.47■□□□□ 0.39
CLPXO76031 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.47■□□□□ 0.39
CLPXO76031 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.46■□□□□ 0.39
CLPXO76031 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLPXO76031 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLPXO76031 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLPXO76031 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLPXO76031 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLPXO76031 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLPXO76031 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLPXO76031 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLPXO76031 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLPXO76031 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.46■□□□□ 0.39
CLPXO76031 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLPXO76031 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLPXO76031 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLPXO76031 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLPXO76031 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLPXO76031 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CLPXO76031 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLPXO76031 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.46■□□□□ 0.38
CLPXO76031 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.46■□□□□ 0.38
CLPXO76031 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLPXO76031 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.45■□□□□ 0.38
CLPXO76031 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLPXO76031 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPXO76031 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CLPXO76031 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.45■□□□□ 0.38
CLPXO76031 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPXO76031 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPXO76031 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLPXO76031 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.45■□□□□ 0.38
CLPXO76031 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CLPXO76031 AC079140.4-201ENST00000507448 529 ntBASIC17.45■□□□□ 0.38
CLPXO76031 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.45■□□□□ 0.38
CLPXO76031 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.45■□□□□ 0.38
CLPXO76031 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.45■□□□□ 0.38
CLPXO76031 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPXO76031 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.45■□□□□ 0.38
CLPXO76031 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPXO76031 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.45■□□□□ 0.38
CLPXO76031 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.45■□□□□ 0.38
CLPXO76031 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.45■□□□□ 0.38
CLPXO76031 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.45■□□□□ 0.38
CLPXO76031 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPXO76031 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPXO76031 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPXO76031 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPXO76031 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.45■□□□□ 0.38
CLPXO76031 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.45■□□□□ 0.38
CLPXO76031 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLPXO76031 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLPXO76031 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.45■□□□□ 0.38
CLPXO76031 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.44■□□□□ 0.38
CLPXO76031 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLPXO76031 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.44■□□□□ 0.38
CLPXO76031 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLPXO76031 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLPXO76031 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLPXO76031 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLPXO76031 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLPXO76031 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLPXO76031 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.44■□□□□ 0.38
CLPXO76031 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.44■□□□□ 0.38
CLPXO76031 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.44■□□□□ 0.38
CLPXO76031 KRT18P14-201ENST00000534205 1250 ntBASIC17.44■□□□□ 0.38
CLPXO76031 TERF1P2-201ENST00000583350 1212 ntBASIC17.44■□□□□ 0.38
CLPXO76031 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.44■□□□□ 0.38
CLPXO76031 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.44■□□□□ 0.38
CLPXO76031 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLPXO76031 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLPXO76031 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLPXO76031 AC141586.5-201ENST00000624546 2050 ntBASIC17.44■□□□□ 0.38
CLPXO76031 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLPXO76031 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CLPXO76031 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLPXO76031 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLPXO76031 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLPXO76031 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLPXO76031 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CLPXO76031 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLPXO76031 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLPXO76031 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms