Protein–RNA interactions for Protein: O75452

RDH16, Retinol dehydrogenase 16, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH16O75452 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RDH16O75452 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RDH16O75452 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.25■□□□□ 0.51
RDH16O75452 SDHAP1-207ENST00000440850 2000 ntBASIC18.25■□□□□ 0.51
RDH16O75452 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.25■□□□□ 0.51
RDH16O75452 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.25■□□□□ 0.51
RDH16O75452 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RDH16O75452 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.24■□□□□ 0.51
RDH16O75452 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.24■□□□□ 0.51
RDH16O75452 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RDH16O75452 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RDH16O75452 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RDH16O75452 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RDH16O75452 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RDH16O75452 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RDH16O75452 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RDH16O75452 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RDH16O75452 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.24■□□□□ 0.51
RDH16O75452 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.24■□□□□ 0.51
RDH16O75452 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.24■□□□□ 0.51
RDH16O75452 AC116562.2-201ENST00000507042 360 ntBASIC18.24■□□□□ 0.51
RDH16O75452 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.24■□□□□ 0.51
RDH16O75452 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
RDH16O75452 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.24■□□□□ 0.51
RDH16O75452 AC011298.2-201ENST00000617989 482 ntBASIC18.24■□□□□ 0.51
RDH16O75452 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.24■□□□□ 0.51
RDH16O75452 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.24■□□□□ 0.51
RDH16O75452 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RDH16O75452 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RDH16O75452 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RDH16O75452 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RDH16O75452 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.24■□□□□ 0.51
RDH16O75452 FSCN1P1-201ENST00000568912 1481 ntBASIC18.24■□□□□ 0.51
RDH16O75452 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.24■□□□□ 0.51
RDH16O75452 RNF165-205ENST00000588679 2904 ntBASIC18.24■□□□□ 0.51
RDH16O75452 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RDH16O75452 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RDH16O75452 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RDH16O75452 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RDH16O75452 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RDH16O75452 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
RDH16O75452 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RDH16O75452 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.23■□□□□ 0.51
RDH16O75452 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RDH16O75452 Z82202.1-201ENST00000623446 1880 ntBASIC18.23■□□□□ 0.51
RDH16O75452 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RDH16O75452 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RDH16O75452 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.23■□□□□ 0.51
RDH16O75452 AC004951.3-201ENST00000418645 1148 ntBASIC18.23■□□□□ 0.51
RDH16O75452 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.23■□□□□ 0.51
RDH16O75452 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.23■□□□□ 0.51
RDH16O75452 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.23■□□□□ 0.51
RDH16O75452 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.23■□□□□ 0.51
RDH16O75452 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.23■□□□□ 0.51
RDH16O75452 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RDH16O75452 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.23■□□□□ 0.51
RDH16O75452 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.23■□□□□ 0.51
RDH16O75452 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RDH16O75452 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.23■□□□□ 0.51
RDH16O75452 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.23■□□□□ 0.51
RDH16O75452 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RDH16O75452 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RDH16O75452 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RDH16O75452 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.23■□□□□ 0.51
RDH16O75452 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RDH16O75452 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.23■□□□□ 0.51
RDH16O75452 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RDH16O75452 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RDH16O75452 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RDH16O75452 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RDH16O75452 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RDH16O75452 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RDH16O75452 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.22■□□□□ 0.51
RDH16O75452 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RDH16O75452 RBM17P1-201ENST00000453646 1190 ntBASIC18.22■□□□□ 0.51
RDH16O75452 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.22■□□□□ 0.51
RDH16O75452 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.22■□□□□ 0.51
RDH16O75452 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.22■□□□□ 0.51
RDH16O75452 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RDH16O75452 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RDH16O75452 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RDH16O75452 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RDH16O75452 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.22■□□□□ 0.51
RDH16O75452 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
RDH16O75452 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RDH16O75452 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RDH16O75452 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RDH16O75452 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RDH16O75452 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RDH16O75452 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.22■□□□□ 0.51
RDH16O75452 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.22■□□□□ 0.51
RDH16O75452 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RDH16O75452 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RDH16O75452 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
RDH16O75452 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.21■□□□□ 0.51
RDH16O75452 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RDH16O75452 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.21■□□□□ 0.51
RDH16O75452 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RDH16O75452 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
RDH16O75452 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms