Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.88■□□□□ 0.77
TSPAN3O60637 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.88■□□□□ 0.77
TSPAN3O60637 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.88■□□□□ 0.77
TSPAN3O60637 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.88■□□□□ 0.77
TSPAN3O60637 SLC25A24-204ENST00000569674 2357 ntBASIC19.88■□□□□ 0.77
TSPAN3O60637 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TSPAN3O60637 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TSPAN3O60637 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TSPAN3O60637 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TSPAN3O60637 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TSPAN3O60637 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.87■□□□□ 0.77
TSPAN3O60637 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TSPAN3O60637 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TSPAN3O60637 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TSPAN3O60637 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TSPAN3O60637 AC125437.2-201ENST00000625180 2167 ntBASIC19.87■□□□□ 0.77
TSPAN3O60637 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TSPAN3O60637 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.87■□□□□ 0.77
TSPAN3O60637 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TSPAN3O60637 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TSPAN3O60637 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.87■□□□□ 0.77
TSPAN3O60637 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.87■□□□□ 0.77
TSPAN3O60637 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.87■□□□□ 0.77
TSPAN3O60637 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TSPAN3O60637 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.87■□□□□ 0.77
TSPAN3O60637 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.87■□□□□ 0.77
TSPAN3O60637 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
TSPAN3O60637 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
TSPAN3O60637 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TSPAN3O60637 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TSPAN3O60637 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.87■□□□□ 0.77
TSPAN3O60637 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TSPAN3O60637 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.87■□□□□ 0.77
TSPAN3O60637 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
TSPAN3O60637 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TSPAN3O60637 KRT8P41-201ENST00000533985 1514 ntBASIC19.86■□□□□ 0.77
TSPAN3O60637 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TSPAN3O60637 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TSPAN3O60637 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TSPAN3O60637 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TSPAN3O60637 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TSPAN3O60637 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TSPAN3O60637 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TSPAN3O60637 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TSPAN3O60637 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TSPAN3O60637 MFAP1P1-201ENST00000442257 1255 ntBASIC19.86■□□□□ 0.77
TSPAN3O60637 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.86■□□□□ 0.77
TSPAN3O60637 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.86■□□□□ 0.77
TSPAN3O60637 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.86■□□□□ 0.77
TSPAN3O60637 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.86■□□□□ 0.77
TSPAN3O60637 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TSPAN3O60637 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.86■□□□□ 0.77
TSPAN3O60637 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TSPAN3O60637 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.86■□□□□ 0.77
TSPAN3O60637 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
TSPAN3O60637 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TSPAN3O60637 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TSPAN3O60637 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TSPAN3O60637 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TSPAN3O60637 AFG3L1P-217ENST00000557444 2447 ntBASIC19.85■□□□□ 0.77
TSPAN3O60637 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TSPAN3O60637 ZNF815P-204ENST00000434898 1737 ntBASIC19.85■□□□□ 0.77
TSPAN3O60637 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TSPAN3O60637 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.85■□□□□ 0.77
TSPAN3O60637 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TSPAN3O60637 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
TSPAN3O60637 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
TSPAN3O60637 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TSPAN3O60637 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.85■□□□□ 0.77
TSPAN3O60637 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.85■□□□□ 0.77
TSPAN3O60637 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.85■□□□□ 0.77
TSPAN3O60637 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.85■□□□□ 0.77
TSPAN3O60637 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.85■□□□□ 0.77
TSPAN3O60637 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.85■□□□□ 0.77
TSPAN3O60637 AP005242.2-201ENST00000580065 1175 ntBASIC19.85■□□□□ 0.77
TSPAN3O60637 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TSPAN3O60637 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TSPAN3O60637 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TSPAN3O60637 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TSPAN3O60637 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.85■□□□□ 0.77
TSPAN3O60637 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
TSPAN3O60637 AC104417.2-201ENST00000562989 1793 ntBASIC19.85■□□□□ 0.77
TSPAN3O60637 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TSPAN3O60637 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.85■□□□□ 0.77
TSPAN3O60637 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.85■□□□□ 0.77
TSPAN3O60637 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TSPAN3O60637 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TSPAN3O60637 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TSPAN3O60637 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TSPAN3O60637 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TSPAN3O60637 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.84■□□□□ 0.77
TSPAN3O60637 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TSPAN3O60637 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TSPAN3O60637 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TSPAN3O60637 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
TSPAN3O60637 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.84■□□□□ 0.77
TSPAN3O60637 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.84■□□□□ 0.77
TSPAN3O60637 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.84■□□□□ 0.77
TSPAN3O60637 AC145285.6-201ENST00000604632 637 ntBASIC19.84■□□□□ 0.77
TSPAN3O60637 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms