Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
KDELR3O43731 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
KDELR3O43731 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.58■□□□□ 0.72
KDELR3O43731 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KDELR3O43731 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
KDELR3O43731 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KDELR3O43731 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KDELR3O43731 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.57■□□□□ 0.72
KDELR3O43731 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KDELR3O43731 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KDELR3O43731 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KDELR3O43731 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.57■□□□□ 0.72
KDELR3O43731 AC097488.1-201ENST00000507834 756 ntBASIC19.57■□□□□ 0.72
KDELR3O43731 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
KDELR3O43731 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.57■□□□□ 0.72
KDELR3O43731 AP000525.1-201ENST00000608286 694 ntBASIC19.57■□□□□ 0.72
KDELR3O43731 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KDELR3O43731 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.57■□□□□ 0.72
KDELR3O43731 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KDELR3O43731 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KDELR3O43731 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
KDELR3O43731 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.57■□□□□ 0.72
KDELR3O43731 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
KDELR3O43731 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KDELR3O43731 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.56■□□□□ 0.72
KDELR3O43731 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KDELR3O43731 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.56■□□□□ 0.72
KDELR3O43731 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.56■□□□□ 0.72
KDELR3O43731 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.56■□□□□ 0.72
KDELR3O43731 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.56■□□□□ 0.72
KDELR3O43731 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
KDELR3O43731 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KDELR3O43731 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.56■□□□□ 0.72
KDELR3O43731 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.56■□□□□ 0.72
KDELR3O43731 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.56■□□□□ 0.72
KDELR3O43731 BX088651.1-201ENST00000540551 451 ntBASIC19.56■□□□□ 0.72
KDELR3O43731 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.56■□□□□ 0.72
KDELR3O43731 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.56■□□□□ 0.72
KDELR3O43731 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.56■□□□□ 0.72
KDELR3O43731 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.56■□□□□ 0.72
KDELR3O43731 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
KDELR3O43731 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KDELR3O43731 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KDELR3O43731 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.56■□□□□ 0.72
KDELR3O43731 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
KDELR3O43731 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.56■□□□□ 0.72
KDELR3O43731 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KDELR3O43731 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
KDELR3O43731 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
KDELR3O43731 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KDELR3O43731 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KDELR3O43731 TSPY21P-201ENST00000433481 731 ntBASIC19.55■□□□□ 0.72
KDELR3O43731 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
KDELR3O43731 SLC25A1P4-201ENST00000567977 778 ntBASIC19.55■□□□□ 0.72
KDELR3O43731 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
KDELR3O43731 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KDELR3O43731 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.55■□□□□ 0.72
KDELR3O43731 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
KDELR3O43731 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
KDELR3O43731 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.54■□□□□ 0.72
KDELR3O43731 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDELR3O43731 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDELR3O43731 KRT8P11-201ENST00000409686 1436 ntBASIC19.54■□□□□ 0.72
KDELR3O43731 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
KDELR3O43731 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDELR3O43731 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDELR3O43731 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
KDELR3O43731 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDELR3O43731 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDELR3O43731 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.54■□□□□ 0.72
KDELR3O43731 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDELR3O43731 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KDELR3O43731 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.54■□□□□ 0.72
KDELR3O43731 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
KDELR3O43731 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.54■□□□□ 0.72
KDELR3O43731 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KDELR3O43731 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
KDELR3O43731 FITM1-202ENST00000559294 800 ntBASIC19.54■□□□□ 0.72
KDELR3O43731 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.54■□□□□ 0.72
KDELR3O43731 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KDELR3O43731 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDELR3O43731 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDELR3O43731 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDELR3O43731 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.54■□□□□ 0.72
KDELR3O43731 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDELR3O43731 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDELR3O43731 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KDELR3O43731 AC096733.2-201ENST00000609937 1394 ntBASIC19.54■□□□□ 0.72
KDELR3O43731 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KDELR3O43731 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KDELR3O43731 AC007952.6-201ENST00000573168 2673 ntBASIC19.53■□□□□ 0.72
KDELR3O43731 AC003957.1-201ENST00000625108 2673 ntBASIC19.53■□□□□ 0.72
KDELR3O43731 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KDELR3O43731 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
KDELR3O43731 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KDELR3O43731 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KDELR3O43731 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KDELR3O43731 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KDELR3O43731 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
KDELR3O43731 MIR1238-201ENST00000408483 83 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms