Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MSI1O43347 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.04■□□□□ 0.8
MSI1O43347 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.04■□□□□ 0.8
MSI1O43347 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MSI1O43347 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
MSI1O43347 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
MSI1O43347 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.03■□□□□ 0.8
MSI1O43347 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MSI1O43347 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MSI1O43347 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.03■□□□□ 0.8
MSI1O43347 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MSI1O43347 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MSI1O43347 AC087499.1-201ENST00000418141 1075 ntBASIC20.03■□□□□ 0.8
MSI1O43347 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MSI1O43347 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.03■□□□□ 0.8
MSI1O43347 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MSI1O43347 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.03■□□□□ 0.8
MSI1O43347 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.03■□□□□ 0.8
MSI1O43347 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MSI1O43347 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MSI1O43347 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.03■□□□□ 0.8
MSI1O43347 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MSI1O43347 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.03■□□□□ 0.8
MSI1O43347 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MSI1O43347 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.03■□□□□ 0.8
MSI1O43347 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.02■□□□□ 0.8
MSI1O43347 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MSI1O43347 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.02■□□□□ 0.8
MSI1O43347 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MSI1O43347 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
MSI1O43347 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MSI1O43347 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.02■□□□□ 0.8
MSI1O43347 FAM207BP-201ENST00000447172 505 ntBASIC20.02■□□□□ 0.8
MSI1O43347 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.02■□□□□ 0.8
MSI1O43347 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.02■□□□□ 0.8
MSI1O43347 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.02■□□□□ 0.8
MSI1O43347 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.02■□□□□ 0.8
MSI1O43347 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MSI1O43347 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MSI1O43347 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MSI1O43347 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.02■□□□□ 0.8
MSI1O43347 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MSI1O43347 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.02■□□□□ 0.8
MSI1O43347 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
MSI1O43347 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
MSI1O43347 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
MSI1O43347 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MSI1O43347 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.01■□□□□ 0.79
MSI1O43347 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSI1O43347 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSI1O43347 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSI1O43347 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.01■□□□□ 0.79
MSI1O43347 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSI1O43347 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSI1O43347 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSI1O43347 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSI1O43347 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MSI1O43347 AC097488.1-201ENST00000507834 756 ntBASIC20.01■□□□□ 0.79
MSI1O43347 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.01■□□□□ 0.79
MSI1O43347 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.01■□□□□ 0.79
MSI1O43347 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.01■□□□□ 0.79
MSI1O43347 SLC25A1P4-201ENST00000567977 778 ntBASIC20.01■□□□□ 0.79
MSI1O43347 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.01■□□□□ 0.79
MSI1O43347 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.01■□□□□ 0.79
MSI1O43347 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.01■□□□□ 0.79
MSI1O43347 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.01■□□□□ 0.79
MSI1O43347 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.01■□□□□ 0.79
MSI1O43347 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSI1O43347 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.01■□□□□ 0.79
MSI1O43347 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSI1O43347 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSI1O43347 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MSI1O43347 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
MSI1O43347 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MSI1O43347 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MSI1O43347 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
MSI1O43347 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
MSI1O43347 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20■□□□□ 0.79
MSI1O43347 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20■□□□□ 0.79
MSI1O43347 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
MSI1O43347 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20■□□□□ 0.79
MSI1O43347 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20■□□□□ 0.79
MSI1O43347 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
MSI1O43347 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20■□□□□ 0.79
MSI1O43347 MMP23A-201ENST00000234610 1017 ntBASIC20■□□□□ 0.79
MSI1O43347 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MSI1O43347 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
MSI1O43347 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MSI1O43347 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
MSI1O43347 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20■□□□□ 0.79
MSI1O43347 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MSI1O43347 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20■□□□□ 0.79
MSI1O43347 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20■□□□□ 0.79
MSI1O43347 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20■□□□□ 0.79
MSI1O43347 AP000692.2-201ENST00000608391 879 ntBASIC20■□□□□ 0.79
MSI1O43347 DGCR10-201ENST00000609839 495 ntBASIC20■□□□□ 0.79
MSI1O43347 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20■□□□□ 0.79
MSI1O43347 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
MSI1O43347 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MSI1O43347 AC007952.6-201ENST00000573168 2673 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms