Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.11■□□□□ 0.49
RRP8O43159 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
RRP8O43159 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.11■□□□□ 0.49
RRP8O43159 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RRP8O43159 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.11■□□□□ 0.49
RRP8O43159 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RRP8O43159 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RRP8O43159 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
RRP8O43159 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RRP8O43159 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.1■□□□□ 0.49
RRP8O43159 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RRP8O43159 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RRP8O43159 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RRP8O43159 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.1■□□□□ 0.49
RRP8O43159 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.1■□□□□ 0.49
RRP8O43159 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RRP8O43159 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.1■□□□□ 0.49
RRP8O43159 DPP3P2-201ENST00000416030 1696 ntBASIC18.1■□□□□ 0.49
RRP8O43159 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RRP8O43159 KRT8P8-201ENST00000434750 1448 ntBASIC18.1■□□□□ 0.49
RRP8O43159 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RRP8O43159 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RRP8O43159 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RRP8O43159 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RRP8O43159 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.1■□□□□ 0.49
RRP8O43159 AL022342.1-201ENST00000400363 863 ntBASIC18.1■□□□□ 0.49
RRP8O43159 TSSC2-201ENST00000450217 709 ntBASIC18.1■□□□□ 0.49
RRP8O43159 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.1■□□□□ 0.49
RRP8O43159 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RRP8O43159 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.1■□□□□ 0.49
RRP8O43159 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.1■□□□□ 0.49
RRP8O43159 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.1■□□□□ 0.49
RRP8O43159 LINC01711-201ENST00000598340 967 ntBASIC18.1■□□□□ 0.49
RRP8O43159 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.1■□□□□ 0.49
RRP8O43159 AL121672.3-201ENST00000608644 468 ntBASIC18.1■□□□□ 0.49
RRP8O43159 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RRP8O43159 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RRP8O43159 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RRP8O43159 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RRP8O43159 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RRP8O43159 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RRP8O43159 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RRP8O43159 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.09■□□□□ 0.49
RRP8O43159 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RRP8O43159 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
RRP8O43159 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
RRP8O43159 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RRP8O43159 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RRP8O43159 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RRP8O43159 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RRP8O43159 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RRP8O43159 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RRP8O43159 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RRP8O43159 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RRP8O43159 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RRP8O43159 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.09■□□□□ 0.49
RRP8O43159 AC004263.2-201ENST00000617183 678 ntBASIC18.09■□□□□ 0.49
RRP8O43159 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RRP8O43159 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RRP8O43159 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RRP8O43159 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.09■□□□□ 0.49
RRP8O43159 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RRP8O43159 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
RRP8O43159 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.08■□□□□ 0.49
RRP8O43159 FEM1AP4-201ENST00000443167 1987 ntBASIC18.08■□□□□ 0.49
RRP8O43159 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.08■□□□□ 0.49
RRP8O43159 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RRP8O43159 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RRP8O43159 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RRP8O43159 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RRP8O43159 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RRP8O43159 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.08■□□□□ 0.48
RRP8O43159 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.08■□□□□ 0.48
RRP8O43159 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.08■□□□□ 0.48
RRP8O43159 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.08■□□□□ 0.48
RRP8O43159 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.08■□□□□ 0.48
RRP8O43159 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RRP8O43159 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.08■□□□□ 0.48
RRP8O43159 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RRP8O43159 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.08■□□□□ 0.48
RRP8O43159 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RRP8O43159 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.08■□□□□ 0.48
RRP8O43159 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.08■□□□□ 0.48
RRP8O43159 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.08■□□□□ 0.48
RRP8O43159 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RRP8O43159 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RRP8O43159 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.08■□□□□ 0.48
RRP8O43159 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RRP8O43159 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RRP8O43159 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RRP8O43159 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RRP8O43159 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RRP8O43159 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RRP8O43159 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RRP8O43159 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RRP8O43159 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.07■□□□□ 0.48
RRP8O43159 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RRP8O43159 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RRP8O43159 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RRP8O43159 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms