Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.92■□□□□ 0.94
CEP290O15078 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CEP290O15078 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CEP290O15078 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CEP290O15078 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.92■□□□□ 0.94
CEP290O15078 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.92■□□□□ 0.94
CEP290O15078 AL160286.2-201ENST00000567150 934 ntBASIC20.92■□□□□ 0.94
CEP290O15078 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CEP290O15078 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
CEP290O15078 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.92■□□□□ 0.94
CEP290O15078 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CEP290O15078 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CEP290O15078 MIR4674-201ENST00000582457 87 ntBASIC20.92■□□□□ 0.94
CEP290O15078 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CEP290O15078 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CEP290O15078 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CEP290O15078 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CEP290O15078 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.91■□□□□ 0.94
CEP290O15078 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CEP290O15078 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.91■□□□□ 0.94
CEP290O15078 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.91■□□□□ 0.94
CEP290O15078 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.91■□□□□ 0.94
CEP290O15078 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.91■□□□□ 0.94
CEP290O15078 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CEP290O15078 AL117328.2-201ENST00000624617 1940 ntBASIC20.91■□□□□ 0.94
CEP290O15078 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CEP290O15078 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.91■□□□□ 0.94
CEP290O15078 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CEP290O15078 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CEP290O15078 RPSAP43-201ENST00000402237 625 ntBASIC20.9■□□□□ 0.94
CEP290O15078 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CEP290O15078 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.9■□□□□ 0.94
CEP290O15078 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CEP290O15078 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CEP290O15078 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
CEP290O15078 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CEP290O15078 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.9■□□□□ 0.94
CEP290O15078 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CEP290O15078 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CEP290O15078 AC106730.1-201ENST00000566722 1090 ntBASIC20.9■□□□□ 0.94
CEP290O15078 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CEP290O15078 AC134684.3-201ENST00000641758 218 ntBASIC20.9■□□□□ 0.94
CEP290O15078 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.9■□□□□ 0.94
CEP290O15078 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CEP290O15078 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CEP290O15078 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CEP290O15078 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.9■□□□□ 0.94
CEP290O15078 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CEP290O15078 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CEP290O15078 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CEP290O15078 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CEP290O15078 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CEP290O15078 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CEP290O15078 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CEP290O15078 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CEP290O15078 AC018712.1-201ENST00000455767 687 ntBASIC20.89■□□□□ 0.93
CEP290O15078 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.89■□□□□ 0.93
CEP290O15078 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.89■□□□□ 0.93
CEP290O15078 AL157888.1-201ENST00000631930 593 ntBASIC20.89■□□□□ 0.93
CEP290O15078 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CEP290O15078 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CEP290O15078 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.89■□□□□ 0.93
CEP290O15078 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
CEP290O15078 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CEP290O15078 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CEP290O15078 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.88■□□□□ 0.93
CEP290O15078 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CEP290O15078 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CEP290O15078 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.88■□□□□ 0.93
CEP290O15078 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CEP290O15078 RPS8P6-201ENST00000426177 609 ntBASIC20.88■□□□□ 0.93
CEP290O15078 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.88■□□□□ 0.93
CEP290O15078 HLA-J-202ENST00000469281 1241 ntBASIC20.88■□□□□ 0.93
CEP290O15078 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.88■□□□□ 0.93
CEP290O15078 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CEP290O15078 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CEP290O15078 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CEP290O15078 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.88■□□□□ 0.93
CEP290O15078 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CEP290O15078 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CEP290O15078 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.88■□□□□ 0.93
CEP290O15078 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.88■□□□□ 0.93
CEP290O15078 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.88■□□□□ 0.93
CEP290O15078 AC145285.3-201ENST00000564603 959 ntBASIC20.88■□□□□ 0.93
CEP290O15078 AC112497.1-201ENST00000624824 639 ntBASIC20.88■□□□□ 0.93
CEP290O15078 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CEP290O15078 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.88■□□□□ 0.93
CEP290O15078 TMEM179-206ENST00000616017 1645 ntBASIC20.88■□□□□ 0.93
CEP290O15078 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
CEP290O15078 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CEP290O15078 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CEP290O15078 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CEP290O15078 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CEP290O15078 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CEP290O15078 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.87■□□□□ 0.93
CEP290O15078 MIR3197-201ENST00000582241 73 ntBASIC20.87■□□□□ 0.93
CEP290O15078 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CEP290O15078 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.87■□□□□ 0.93
CEP290O15078 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CEP290O15078 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms