Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC31.3■■■□□ 2.6
CHD1O14646 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CHD1O14646 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC31.3■■■□□ 2.6
CHD1O14646 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
CHD1O14646 ME2-208ENST00000638937 2471 ntTSL 5 BASIC31.3■■■□□ 2.6
CHD1O14646 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CHD1O14646 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
CHD1O14646 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
CHD1O14646 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CHD1O14646 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CHD1O14646 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC31.3■■■□□ 2.6
CHD1O14646 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC31.3■■■□□ 2.6
CHD1O14646 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CHD1O14646 GUSBP5-202ENST00000510805 1989 ntBASIC31.3■■■□□ 2.6
CHD1O14646 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHD1O14646 DFFB-203ENST00000341385 572 ntTSL 5 BASIC31.29■■■□□ 2.6
CHD1O14646 GGCT-205ENST00000409436 954 ntTSL 3 BASIC31.29■■■□□ 2.6
CHD1O14646 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC31.29■■■□□ 2.6
CHD1O14646 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CHD1O14646 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHD1O14646 RPL18-209ENST00000550645 463 ntTSL 5 BASIC31.29■■■□□ 2.6
CHD1O14646 RPL18-214ENST00000552588 559 ntTSL 3 BASIC31.29■■■□□ 2.6
CHD1O14646 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CHD1O14646 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC31.29■■■□□ 2.6
CHD1O14646 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC31.29■■■□□ 2.6
CHD1O14646 AC148477.8-201ENST00000624298 468 ntBASIC31.29■■■□□ 2.6
CHD1O14646 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHD1O14646 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC31.29■■■□□ 2.6
CHD1O14646 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
CHD1O14646 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
CHD1O14646 KRT18P67-201ENST00000432816 1264 ntBASIC31.29■■■□□ 2.6
CHD1O14646 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CHD1O14646 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
CHD1O14646 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
CHD1O14646 BAALC-202ENST00000306391 243 ntTSL 5 BASIC31.28■■■□□ 2.6
CHD1O14646 BAALC-204ENST00000330955 222 ntTSL 5 BASIC31.28■■■□□ 2.6
CHD1O14646 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CHD1O14646 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
CHD1O14646 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC31.28■■■□□ 2.6
CHD1O14646 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC31.28■■■□□ 2.6
CHD1O14646 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC31.28■■■□□ 2.6
CHD1O14646 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC31.28■■■□□ 2.6
CHD1O14646 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CHD1O14646 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC31.28■■■□□ 2.6
CHD1O14646 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC31.28■■■□□ 2.6
CHD1O14646 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHD1O14646 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC31.27■■■□□ 2.6
CHD1O14646 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHD1O14646 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC31.27■■■□□ 2.6
CHD1O14646 RNPS1P1-201ENST00000507437 918 ntBASIC31.27■■■□□ 2.6
CHD1O14646 PGAM5P1-201ENST00000518923 814 ntBASIC31.27■■■□□ 2.6
CHD1O14646 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC31.27■■■□□ 2.6
CHD1O14646 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
CHD1O14646 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CHD1O14646 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CHD1O14646 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
CHD1O14646 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CHD1O14646 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CHD1O14646 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CHD1O14646 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHD1O14646 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHD1O14646 NUS1P2-201ENST00000417358 873 ntBASIC31.27■■■□□ 2.6
CHD1O14646 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC31.27■■■□□ 2.6
CHD1O14646 AC018712.1-201ENST00000455767 687 ntBASIC31.27■■■□□ 2.6
CHD1O14646 TPM1-218ENST00000559281 851 ntTSL 5 BASIC31.27■■■□□ 2.6
CHD1O14646 TERC-201ENST00000602385 541 ntBASIC31.27■■■□□ 2.6
CHD1O14646 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
CHD1O14646 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC31.26■■■□□ 2.59
CHD1O14646 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CHD1O14646 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC31.26■■■□□ 2.59
CHD1O14646 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
CHD1O14646 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CHD1O14646 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC31.26■■■□□ 2.59
CHD1O14646 FEM1AP1-201ENST00000431297 1995 ntBASIC31.26■■■□□ 2.59
CHD1O14646 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC31.26■■■□□ 2.59
CHD1O14646 LSM5-204ENST00000409909 740 ntTSL 2 BASIC31.26■■■□□ 2.59
CHD1O14646 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
CHD1O14646 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CHD1O14646 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CHD1O14646 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC31.25■■■□□ 2.59
CHD1O14646 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
CHD1O14646 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CHD1O14646 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC31.25■■■□□ 2.59
CHD1O14646 AC005104.2-201ENST00000427818 678 ntBASIC31.25■■■□□ 2.59
CHD1O14646 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHD1O14646 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC31.25■■■□□ 2.59
CHD1O14646 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CHD1O14646 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC31.25■■■□□ 2.59
CHD1O14646 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC31.25■■■□□ 2.59
CHD1O14646 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CHD1O14646 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC31.25■■■□□ 2.59
CHD1O14646 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CHD1O14646 AP001271.2-201ENST00000624018 1556 ntBASIC31.25■■■□□ 2.59
CHD1O14646 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHD1O14646 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHD1O14646 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CHD1O14646 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
CHD1O14646 AL031284.1-201ENST00000419297 478 ntBASIC31.24■■■□□ 2.59
CHD1O14646 IGHV3-47-201ENST00000425060 335 ntBASIC31.24■■■□□ 2.59
CHD1O14646 AC010327.4-202ENST00000591484 748 ntBASIC31.24■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms