Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SOX15-203ENST00000570788 1093 ntBASIC15.46■□□□□ 0.07
UPK2O00526 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.46■□□□□ 0.07
UPK2O00526 AC008687.6-201ENST00000596318 630 ntBASIC15.46■□□□□ 0.07
UPK2O00526 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.46■□□□□ 0.07
UPK2O00526 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK2O00526 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK2O00526 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.46■□□□□ 0.07
UPK2O00526 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
UPK2O00526 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
UPK2O00526 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.46■□□□□ 0.07
UPK2O00526 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
UPK2O00526 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK2O00526 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
UPK2O00526 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
UPK2O00526 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
UPK2O00526 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
UPK2O00526 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
UPK2O00526 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.06
UPK2O00526 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
UPK2O00526 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
UPK2O00526 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
UPK2O00526 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UPK2O00526 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.45■□□□□ 0.06
UPK2O00526 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
UPK2O00526 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.45■□□□□ 0.06
UPK2O00526 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK2O00526 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK2O00526 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK2O00526 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
UPK2O00526 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UPK2O00526 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
UPK2O00526 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK2O00526 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.45■□□□□ 0.06
UPK2O00526 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK2O00526 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK2O00526 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.45■□□□□ 0.06
UPK2O00526 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.45■□□□□ 0.06
UPK2O00526 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.45■□□□□ 0.06
UPK2O00526 AC098934.4-201ENST00000564127 592 ntBASIC15.45■□□□□ 0.06
UPK2O00526 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.45■□□□□ 0.06
UPK2O00526 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.45■□□□□ 0.06
UPK2O00526 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.45■□□□□ 0.06
UPK2O00526 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.45■□□□□ 0.06
UPK2O00526 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
UPK2O00526 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.45■□□□□ 0.06
UPK2O00526 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.45■□□□□ 0.06
UPK2O00526 AC133041.1-202ENST00000642053 222 ntBASIC15.45■□□□□ 0.06
UPK2O00526 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UPK2O00526 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
UPK2O00526 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK2O00526 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK2O00526 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK2O00526 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.45■□□□□ 0.06
UPK2O00526 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK2O00526 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK2O00526 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK2O00526 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
UPK2O00526 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK2O00526 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK2O00526 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK2O00526 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
UPK2O00526 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK2O00526 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK2O00526 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
UPK2O00526 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK2O00526 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK2O00526 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK2O00526 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.44■□□□□ 0.06
UPK2O00526 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK2O00526 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK2O00526 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
UPK2O00526 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.44■□□□□ 0.06
UPK2O00526 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.44■□□□□ 0.06
UPK2O00526 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.44■□□□□ 0.06
UPK2O00526 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.44■□□□□ 0.06
UPK2O00526 AL109923.1-201ENST00000618799 583 ntBASIC15.44■□□□□ 0.06
UPK2O00526 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
UPK2O00526 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.44■□□□□ 0.06
UPK2O00526 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK2O00526 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
UPK2O00526 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK2O00526 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
UPK2O00526 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
UPK2O00526 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK2O00526 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
UPK2O00526 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK2O00526 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK2O00526 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.44■□□□□ 0.06
UPK2O00526 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
UPK2O00526 FP475955.4-201ENST00000623131 1990 ntBASIC15.44■□□□□ 0.06
UPK2O00526 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK2O00526 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.43■□□□□ 0.06
UPK2O00526 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.43■□□□□ 0.06
UPK2O00526 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK2O00526 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
UPK2O00526 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK2O00526 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
UPK2O00526 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
UPK2O00526 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
UPK2O00526 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms